Factsheet for HORVU3Hr1G001420.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G001320.1	Barley	plasma membrane, vacuole	76.15	59.93
TraesCSU01G041600.1	Wheat	plasma membrane	38.53	29.17
TraesCS3D01G002300.1	Wheat	plasma membrane	38.07	28.82
TraesCS3A01G008700.1	Wheat	plasma membrane	38.07	28.82
Os01t0112400-01	Rice	plasma membrane	32.11	24.48
EES00431	Sorghum	plasma membrane	28.9	21.8
Zm00001d040108_P001	Maize	plasma membrane	29.36	21.4
HORVU3Hr1G079560.5	Barley	golgi, plasma membrane	16.05	14.17
HORVU7Hr1G121250.3	Barley	cytosol, golgi, plasma membrane	16.51	12.33
HORVU7Hr1G043590.2	Barley	plasma membrane	17.43	12.3
Solyc01g079890.2.1	Tomato	plasma membrane	15.6	11.97
HORVU7Hr1G043600.1	Barley	golgi, peroxisome	17.43	11.91
KRH32130	Soybean	plasma membrane	14.68	11.59
PGSC0003DMT400084932	Potato	plasma membrane	15.14	11.5
HORVU5Hr1G085710.3	Barley	cytosol, peroxisome, plasma membrane	17.43	11.41
HORVU3Hr1G014440.3	Barley	golgi, mitochondrion, plasma membrane	13.3	11.24
KRH71310	Soybean	plasma membrane	14.68	10.81
VIT_05s0020g02740.t01	Wine grape	plasma membrane	14.22	10.58
HORVU7Hr1G038220.1	Barley	endoplasmic reticulum, golgi, peroxisome	14.22	10.33
Bra020777.1-P	Field mustard	plasma membrane	12.39	9.93
CDY05231	Canola	plasma membrane	12.39	9.93
CDY27709	Canola	plasma membrane	12.39	9.93
AT3G06100.1	Thale cress	plasma membrane	11.93	9.45
HORVU6Hr1G075850.4	Barley	nucleus, plasma membrane, vacuole	13.3	9.12
HORVU1Hr1G047100.3	Barley	plastid	14.68	8.72
HORVU7Hr1G072160.1	Barley	extracellular, golgi	3.21	8.43
HORVU7Hr1G038270.3	Barley	endoplasmic reticulum, golgi, vacuole	13.76	8.2
HORVU7Hr1G088900.1	Barley	cytosol, golgi, plasma membrane	7.34	7.58
HORVU0Hr1G017130.2	Barley	endoplasmic reticulum, golgi, peroxisome	4.13	6.0

Protein Annotations

EnsemblPlants:HORVU3Hr1G001420.2	EnsemblPlantsGene:HORVU3Hr1G001420	Gene3D:1.20.1080.10	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	InterPro:IPR023271	PANTHER:PTHR19139	PANTHER:PTHR19139:SF182	SEG:seg
SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI000B484487	UniProt:A0A287JWH1	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr3H:+:3025624..3026677

Molecular Weight (calculated)

20133.5 Da

IEP (calculated)

12.225

GRAVY (calculated)

-0.394

Length

218 amino acids

Sequence
(BLAST)

001: LILGPAMXRT FXEHRDPVTG NSXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXPWRK LPLYVAMQIG ASVLACLSVN AMMEPHEDNF YGTVPRPPGA
101: GARLPFLLEL LASAVLMIVI ATVARSSAVQ QGGWRDRHRG GGRDAGAGDW AGVGRVDEPG EEPWPGDRLR AVHLHLDLRH RARRRHAARR ALQHGRPTVR
201: RGRRLPLRRP GRVQQGGR

Best Arabidopsis Sequence Match ( AT5G37820.2 )
(BLAST)

001: MYKSSSTSKF STHQKFQFLF YFSPNKKLTS TFFLKKMTSH GEEIEDEQIS RIEKGNCKDS QGGMETAICS SPSIVCLTQK LIAEMIGTYF IIFSGCGVVV
101: VNVLYGGTIT FPGICVTWGL IVMVMIYSTG HISGAHFNPA VTVTFAVFRR FPWYQVPLYI GAQLTGSLLA SLTLRLMFNV TPKAFFGTTP TDSSGQALVA
201: EIIISFLLMF VISGVATDSR ATGELAGIAV GMTIILNVFV AGPISGASMN PARSLGPAIV MGRYKGIWVY IVGPFVGIFA GGFVYNFMRF TDKPLRELTK
301: SASFLRSVAQ KDNASKSDG

Arabidopsis Description

NIP4;2NOD26-like intrinsic protein 4;2 [Source:TAIR;Acc:AT5G37820]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.