Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- golgi 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER91378 | Sorghum | plastid | 62.4 | 76.08 |
| Os10t0513200-01 | Rice | plasma membrane | 64.03 | 75.56 |
| Zm00001d032461_P001 | Maize | plastid | 60.22 | 73.18 |
| GSMUA_AchrUn_... | Banana | extracellular | 41.96 | 69.06 |
| HORVU3Hr1G014440.3 | Barley | golgi, mitochondrion, plasma membrane | 48.23 | 68.6 |
| Solyc08g013730.2.1 | Tomato | cytosol, plasma membrane, plastid | 52.86 | 65.76 |
| PGSC0003DMT400014852 | Potato | cytosol, plasma membrane, plastid | 52.59 | 65.2 |
| VIT_02s0025g03260.t01 | Wine grape | plastid | 52.86 | 65.1 |
| CDX94261 | Canola | plasma membrane | 50.68 | 61.79 |
| KRH35064 | Soybean | plastid | 50.14 | 61.54 |
| CDY25253 | Canola | plasma membrane | 50.41 | 61.46 |
| Bra033181.1-P | Field mustard | plasma membrane | 50.41 | 61.46 |
| AT4G10380.1 | Thale cress | cytosol | 50.41 | 60.86 |
| Bra000710.1-P | Field mustard | plasma membrane | 49.32 | 60.13 |
| CDX90757 | Canola | plasma membrane | 49.32 | 60.13 |
| CDY05100 | Canola | plasma membrane | 49.05 | 59.8 |
| CDX67591 | Canola | plasma membrane | 49.05 | 59.8 |
| KRG91709 | Soybean | plastid | 40.05 | 57.65 |
| GSMUA_Achr1P04130_001 | Banana | plasma membrane | 53.41 | 54.6 |
| CDY72002 | Canola | plastid | 10.35 | 44.71 |
| HORVU3Hr1G079560.5 | Barley | golgi, plasma membrane | 27.25 | 40.49 |
| HORVU7Hr1G121250.3 | Barley | cytosol, golgi, plasma membrane | 29.16 | 36.64 |
| CDY16269 | Canola | plastid | 6.81 | 34.72 |
| CDY51581 | Canola | plastid | 6.81 | 34.72 |
| HORVU7Hr1G038220.1 | Barley | endoplasmic reticulum, golgi, peroxisome | 27.25 | 33.33 |
| HORVU6Hr1G075850.4 | Barley | nucleus, plasma membrane, vacuole | 28.61 | 33.02 |
| HORVU7Hr1G043590.2 | Barley | plasma membrane | 26.98 | 32.04 |
| HORVU0Hr1G017130.2 | Barley | endoplasmic reticulum, golgi, peroxisome | 13.08 | 32.0 |
| HORVU5Hr1G085710.3 | Barley | cytosol, peroxisome, plasma membrane | 28.88 | 31.83 |
| HORVU7Hr1G043600.1 | Barley | golgi, peroxisome | 26.98 | 31.03 |
| HORVU7Hr1G072160.1 | Barley | extracellular, golgi | 5.45 | 24.1 |
| HORVU7Hr1G038270.3 | Barley | endoplasmic reticulum, golgi, vacuole | 23.98 | 24.04 |
| HORVU7Hr1G088900.1 | Barley | cytosol, golgi, plasma membrane | 13.08 | 22.75 |
| HORVU3Hr1G001320.1 | Barley | plasma membrane, vacuole | 14.17 | 18.77 |
| HORVU3Hr1G001420.2 | Barley | nucleus | 8.72 | 14.68 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.1 | UniProt:A0A287FF26 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | EnsemblPlantsGene:HORVU1Hr1G047100 | EnsemblPlants:HORVU1Hr1G047100.3 | InterPro:IPR023271 | InterPro:MIP |
| InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF102 |
| SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI000B46C740 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr1H:-:347380772..347387657
Molecular Weight (calculated)
37958.8 Da
IEP (calculated)
7.906
GRAVY (calculated)
0.343
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAAAGAGAG AETPNPSAPA TPGTPAPLFA GPRVDSLSYE RKSMPRCRCL PVEAWMSPNA CVVEIPSPDV SLPRKLGAEF VGTFILIFFA TAAPIVNQKY
101: GGVISPFGNA ACAGLAVTTI ILSTGHISGA HLNPSLTIAF AAFRHFPWLQ VPAYVTVQVL GSICAGFALK GVFHPFLSGG VTVPDVAIST AQALFTEFII
201: TFNLLFVVTA VATDTRAVGE LAGIAVGAAV TLNILVAGAD DGRVDEPGED AGAGGRGGEL QAAVDIPGGA DAGRGVRRRR VQAGQAQRRQ RRDAAPAAQL
301: PTLIDVCART PPRALSGWLL IYATIDRAAA VRSITTSTIS VFPCHGHTVT AKICAFRDCN NELTPFC
101: GGVISPFGNA ACAGLAVTTI ILSTGHISGA HLNPSLTIAF AAFRHFPWLQ VPAYVTVQVL GSICAGFALK GVFHPFLSGG VTVPDVAIST AQALFTEFII
201: TFNLLFVVTA VATDTRAVGE LAGIAVGAAV TLNILVAGAD DGRVDEPGED AGAGGRGGEL QAAVDIPGGA DAGRGVRRRR VQAGQAQRRQ RRDAAPAAQL
301: PTLIDVCART PPRALSGWLL IYATIDRAAA VRSITTSTIS VFPCHGHTVT AKICAFRDCN NELTPFC
001: MDHEEIPSTP STPATTPGTP GAPLFGGFEG KRNGHNGRYT PKSLLKSCKC FSVDNEWALE DGRLPPVTCS LPPPNVSLYR KLGAEFVGTL ILIFAGTATA
101: IVNQKTDGAE TLIGCAASAG LAVMIVILST GHISGAHLNP AVTIAFAALK HFPWKHVPVY IGAQVMASVS AAFALKAVFE PTMSGGVTVP TVGLSQAFAL
201: EFIISFNLMF VVTAVATDTR AVGELAGIAV GATVMLNILI AGPATSASMN PVRTLGPAIA ANNYRAIWVY LTAPILGALI GAGTYTIVKL PEEDEAPKER
301: RSFRR
101: IVNQKTDGAE TLIGCAASAG LAVMIVILST GHISGAHLNP AVTIAFAALK HFPWKHVPVY IGAQVMASVS AAFALKAVFE PTMSGGVTVP TVGLSQAFAL
201: EFIISFNLMF VVTAVATDTR AVGELAGIAV GATVMLNILI AGPATSASMN PVRTLGPAIA ANNYRAIWVY LTAPILGALI GAGTYTIVKL PEEDEAPKER
301: RSFRR
Arabidopsis Description
NIP6-1Aquaporin NIP6-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAI4]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.