Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 5
- cytosol 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d032461_P001 | Maize | plastid | 94.68 | 94.37 |
| Os10t0513200-01 | Rice | plasma membrane | 91.69 | 88.75 |
| TraesCS1B01G202700.1 | Wheat | plastid | 87.04 | 87.92 |
| TraesCS1A01G177500.1 | Wheat | plastid | 87.38 | 87.67 |
| TraesCS1D01G176000.1 | Wheat | plastid | 87.04 | 87.63 |
| GSMUA_AchrUn_... | Banana | extracellular | 62.13 | 83.86 |
| Solyc08g013730.2.1 | Tomato | cytosol, plasma membrane, plastid | 77.41 | 78.98 |
| HORVU3Hr1G014440.3 | Barley | golgi, mitochondrion, plasma membrane | 67.11 | 78.29 |
| PGSC0003DMT400014852 | Potato | cytosol, plasma membrane, plastid | 76.74 | 78.04 |
| VIT_02s0025g03260.t01 | Wine grape | plastid | 76.74 | 77.52 |
| CDY72002 | Canola | plastid | 21.26 | 75.29 |
| KRH35064 | Soybean | plastid | 71.76 | 72.24 |
| AT4G10380.1 | Thale cress | cytosol | 72.43 | 71.71 |
| CDY25253 | Canola | plasma membrane | 71.43 | 71.43 |
| Bra033181.1-P | Field mustard | plasma membrane | 71.43 | 71.43 |
| CDX94261 | Canola | plasma membrane | 71.43 | 71.43 |
| Bra000710.1-P | Field mustard | plasma membrane | 71.1 | 71.1 |
| CDX90757 | Canola | plasma membrane | 71.1 | 71.1 |
| CDY05100 | Canola | plasma membrane | 71.1 | 71.1 |
| CDX67591 | Canola | plasma membrane | 70.1 | 70.1 |
| KRG91709 | Soybean | plastid | 59.14 | 69.8 |
| CDY51581 | Canola | plastid | 16.61 | 69.44 |
| CDY16269 | Canola | plastid | 16.28 | 68.06 |
| GSMUA_Achr1P04130_001 | Banana | plasma membrane | 74.75 | 62.67 |
| HORVU1Hr1G047100.3 | Barley | plastid | 76.08 | 62.4 |
| OQU79872 | Sorghum | cytosol, peroxisome, vacuole | 41.2 | 41.75 |
| OQU77604 | Sorghum | plasma membrane | 38.87 | 41.34 |
| EES07262 | Sorghum | cytosol, peroxisome, plasma membrane | 40.53 | 41.08 |
| KXG31601 | Sorghum | golgi, plasma membrane, plastid | 37.87 | 40.43 |
| EER89472 | Sorghum | cytosol, plasma membrane, plastid | 39.2 | 40.0 |
| EES14542 | Sorghum | golgi, peroxisome, vacuole | 36.54 | 38.06 |
| EES06549 | Sorghum | cytoskeleton, cytosol, peroxisome | 35.22 | 36.93 |
| KXG20157 | Sorghum | golgi, nucleus, plasma membrane | 32.56 | 33.68 |
| KXG24412 | Sorghum | vacuole | 31.56 | 30.84 |
| EES00431 | Sorghum | plasma membrane | 25.91 | 26.99 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.1 | EntrezGene:8065167 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | UniProt:C5WW78 |
| EnsemblPlants:EER91378 | ProteinID:EER91378 | ProteinID:EER91378.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 | GO:GO:0006833 | GO:GO:0007154 |
| GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009987 | GO:GO:0009991 | GO:GO:0010036 | GO:GO:0015105 |
| GO:GO:0015250 | GO:GO:0015267 | GO:GO:0015700 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016328 |
| GO:GO:0034220 | GO:GO:0035445 | GO:GO:0046685 | GO:GO:0046713 | GO:GO:0046715 | GO:GO:0055085 |
| GO:GO:0080029 | GO:GO:0080138 | InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 |
| PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF102 | EnsemblPlantsGene:SORBI_3001G195800 | SUPFAM:SSF81338 |
| unigene:Sbi.1433 | TMHMM:TMhelix | UniParc:UPI0001A8240A | RefSeq:XP_002464380.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr1:+:17588588..17593923
Molecular Weight (calculated)
31153.8 Da
IEP (calculated)
8.990
GRAVY (calculated)
0.471
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEPGSTTPP NGSAPATPGT PAPLFSGGPR VDSLSYERKS MPRCKCLPAV EGWGIATHTC VVEIPAPDVS LTRKLGAEFV GTFILIFFAT AAPIVNQKYG
101: GAISPFGNAA CAGLAVTIII LSTGHISGAH LNPSLTIAFA ALRHFPWLQV PAYVSVQVLG SICASFALKG VFHPFLSGGV TVPDVTISTA QAFFTEFIIS
201: FNLLFVVTAV ATDTRAVGEL AGIAVGAAVT LNILVAGPTT GGSMNPVRTL GPAVAAGNYR QLWIYLLAPT LGALAGAGVY TAVKLRDENG ETPRTQRSFR
301: R
101: GAISPFGNAA CAGLAVTIII LSTGHISGAH LNPSLTIAFA ALRHFPWLQV PAYVSVQVLG SICASFALKG VFHPFLSGGV TVPDVTISTA QAFFTEFIIS
201: FNLLFVVTAV ATDTRAVGEL AGIAVGAAVT LNILVAGPTT GGSMNPVRTL GPAVAAGNYR QLWIYLLAPT LGALAGAGVY TAVKLRDENG ETPRTQRSFR
301: R
001: MAPPEAEVGA VMVMAPPTPG TPGTPGGPLI TGMRVDSMSF DHRKPTPRCK CLPVMGSTWG QHDTCFTDFP SPDVSLTRKL GAEFVGTFIL IFTATAGPIV
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR
Arabidopsis Description
NIP5-1At4g10380 [Source:UniProtKB/TrEMBL;Acc:A3KPG0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.