Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- golgi 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G176000.1 | Wheat | plastid | 99.0 | 99.33 |
| TraesCS1B01G202700.1 | Wheat | plastid | 97.0 | 97.65 |
| EER91378 | Sorghum | plastid | 87.67 | 87.38 |
| Os10t0513200-01 | Rice | plasma membrane | 89.33 | 86.17 |
| Zm00001d032461_P001 | Maize | plastid | 85.0 | 84.44 |
| HORVU3Hr1G014440.3 | Barley | golgi, mitochondrion, plasma membrane | 71.67 | 83.33 |
| GSMUA_AchrUn_... | Banana | extracellular | 61.33 | 82.51 |
| Solyc08g013730.2.1 | Tomato | cytosol, plasma membrane, plastid | 75.0 | 76.27 |
| VIT_02s0025g03260.t01 | Wine grape | plastid | 75.33 | 75.84 |
| PGSC0003DMT400014852 | Potato | cytosol, plasma membrane, plastid | 74.67 | 75.68 |
| CDY72002 | Canola | plastid | 21.33 | 75.29 |
| KRH35064 | Soybean | plastid | 71.0 | 71.24 |
| CDX94261 | Canola | plasma membrane | 71.0 | 70.76 |
| AT4G10380.1 | Thale cress | cytosol | 71.67 | 70.72 |
| Bra033181.1-P | Field mustard | plasma membrane | 70.67 | 70.43 |
| CDY25253 | Canola | plasma membrane | 70.67 | 70.43 |
| CDY51581 | Canola | plastid | 16.67 | 69.44 |
| KRG91709 | Soybean | plastid | 59.0 | 69.41 |
| CDX90757 | Canola | plasma membrane | 69.33 | 69.1 |
| Bra000710.1-P | Field mustard | plasma membrane | 69.33 | 69.1 |
| CDY05100 | Canola | plasma membrane | 69.33 | 69.1 |
| CDX67591 | Canola | plasma membrane | 68.33 | 68.11 |
| CDY16269 | Canola | plastid | 16.33 | 68.06 |
| GSMUA_Achr1P04130_001 | Banana | plasma membrane | 73.33 | 61.28 |
| TraesCS5A01G525500.1 | Wheat | plasma membrane | 37.0 | 42.86 |
| TraesCS5A01G342900.1 | Wheat | golgi, peroxisome, plasma membrane | 41.0 | 42.56 |
| TraesCS7A01G553000.1 | Wheat | cytosol, golgi, plasma membrane | 40.33 | 41.72 |
| TraesCS7A01G215700.1 | Wheat | plasma membrane | 37.0 | 39.93 |
| TraesCS6A01G307300.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 38.67 | 39.32 |
| TraesCS7A01G187800.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 39.0 | 39.0 |
| TraesCS7A01G303800.1 | Wheat | plasma membrane | 35.0 | 38.75 |
| TraesCS6A01G078300.1 | Wheat | plasma membrane | 36.67 | 38.6 |
| TraesCS3A01G139100.3 | Wheat | plasma membrane | 37.0 | 38.14 |
| TraesCS7A01G355000.1 | Wheat | peroxisome | 33.33 | 35.84 |
| TraesCS3A01G008700.1 | Wheat | plasma membrane | 27.0 | 28.12 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.1 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0008150 |
| GO:GO:0009605 | GO:GO:0009987 | GO:GO:0009991 | GO:GO:0010036 | GO:GO:0015105 | GO:GO:0015250 |
| GO:GO:0015267 | GO:GO:0015700 | GO:GO:0016020 | GO:GO:0016328 | GO:GO:0046685 | GO:GO:0046713 |
| GO:GO:0046715 | GO:GO:0055085 | GO:GO:0080029 | InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS |
| PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF102 | SUPFAM:SSF81338 |
| TMHMM:TMhelix | EnsemblPlantsGene:TraesCS1A01G177500 | EnsemblPlants:TraesCS1A01G177500.1 | TIGR:cd00333 | SEG:seg | : |
Description
No Description!
Coordinates
chr1A:+:320334614..320338168
Molecular Weight (calculated)
31140.0 Da
IEP (calculated)
9.048
GRAVY (calculated)
0.523
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAAAATGAE TPNLSAPATP GTPAPLFAGP RVDSLSYERK SMPRCRCLPV DAWMSPSACV LEIPAPDVSL PRKLGAEFVG TFILIFFATA APIVNQKYGG
101: VISPFGNAAC AGLAVTTIIL STGHISGAHL NPSLTIAFAA FRHFPWLQVP AYVTAQVLGS ICAGFALKGV FHPFLSGGVT VPDVSISTAQ ALFTEFIITF
201: NLLFVVTAVA TDTRAVGELA GIAVGAAVTL NILVAGPTTG GSMNPVRTLG PAVAAGNYRQ LWIYLVAPTL GAVCGAGVYK LVKLRDVNGE TPRPQRSFRR
101: VISPFGNAAC AGLAVTTIIL STGHISGAHL NPSLTIAFAA FRHFPWLQVP AYVTAQVLGS ICAGFALKGV FHPFLSGGVT VPDVSISTAQ ALFTEFIITF
201: NLLFVVTAVA TDTRAVGELA GIAVGAAVTL NILVAGPTTG GSMNPVRTLG PAVAAGNYRQ LWIYLVAPTL GAVCGAGVYK LVKLRDVNGE TPRPQRSFRR
001: MAPPEAEVGA VMVMAPPTPG TPGTPGGPLI TGMRVDSMSF DHRKPTPRCK CLPVMGSTWG QHDTCFTDFP SPDVSLTRKL GAEFVGTFIL IFTATAGPIV
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR
Arabidopsis Description
NIP5-1At4g10380 [Source:UniProtKB/TrEMBL;Acc:A3KPG0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.