Factsheet for TraesCS7A01G553000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plasma membrane
Any Predictor:	cytosol, golgi, plasma membrane
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G539500.1	Wheat	cytosol, golgi, plasma membrane	98.62	98.28
TraesCS7B01G476700.1	Wheat	cytosol, golgi, plasma membrane	97.59	97.25
HORVU7Hr1G121250.3	Barley	cytosol, golgi, plasma membrane	94.48	93.84
TraesCS5A01G342900.1	Wheat	golgi, peroxisome, plasma membrane	91.72	92.04
Zm00001d037733_P001	Maize	plasma membrane	78.62	80.28
OQU77604	Sorghum	plasma membrane	77.24	79.15
Os05t0205050-00	Rice	cytosol, peroxisome, plastid	56.21	75.46
TraesCS7A01G215700.1	Wheat	plasma membrane	66.55	69.42
Os05t0205000-01	Rice	cytosol	21.03	69.32
TraesCS3A01G139100.3	Wheat	plasma membrane	58.62	58.42
TraesCS7A01G355000.1	Wheat	peroxisome	50.34	52.33
TraesCS1A01G177500.1	Wheat	plastid	41.72	40.33
TraesCS5A01G525500.1	Wheat	plasma membrane	35.86	40.15
GSMUA_Achr10P...	Banana	cytosol, extracellular, plastid	34.83	40.08
TraesCS6A01G307300.1	Wheat	endoplasmic reticulum, golgi, peroxisome	38.97	38.31
TraesCS7A01G187800.1	Wheat	endoplasmic reticulum, golgi, peroxisome	38.62	37.33
TraesCS7A01G303800.1	Wheat	plasma membrane	32.07	34.32
TraesCS6A01G078300.1	Wheat	plasma membrane	32.41	32.98
TraesCS3A01G008700.1	Wheat	plasma membrane	29.31	29.51

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0055085
InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221
PANTHER:PTHR19139	PANTHER:PTHR19139:SF189	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7A01G553000
EnsemblPlants:TraesCS7A01G553000.1	TIGR:cd00333	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7A:+:725912092..725915662

Molecular Weight (calculated)

30311.7 Da

IEP (calculated)

7.960

GRAVY (calculated)

0.451

Length

290 amino acids

Sequence
(BLAST)

001: MAGGEHGAGA NGLQDQDLTG ALEEGRGGVN QPAGCENSGE QALSSTSNQP MLSVQFVQKI LAEIFGTYFL IFAGCAAVAV NKRTAGTVTF PGICITWGLA
101: VMVMVYSVGH ISGAHFNPAV TFAFATCGRF PWRQVPAYAA AQVIGSTAAS ITLRLLFGGE PEHFFGTVPS GSDVQSLVLE FIITFYLMFV VSGVATDNRA
201: IGELAGLAVG ATVLLNVLFA GPISGASMNP ARTIGPAMVL GRYTGIWVYI IGPVSGAVSG AWAYNLIRFT NKPLREITRT GSFLRSARMS

Best Arabidopsis Sequence Match ( AT4G18910.1 )
(BLAST)

001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR

Arabidopsis Description

NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [peroxisome,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.