CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037733_P001	Maize	plasma membrane	92.93	92.61
TraesCS5D01G347600.1	Wheat	cytosol, golgi, plasma membrane	79.51	78.12
TraesCS5B01G342100.1	Wheat	cytosol, golgi, plasma membrane	79.15	77.78
TraesCS7B01G476700.1	Wheat	cytosol, golgi, plasma membrane	79.51	77.32
TraesCS7A01G553000.1	Wheat	cytosol, golgi, plasma membrane	79.15	77.24
TraesCS5A01G342900.1	Wheat	golgi, peroxisome, plasma membrane	78.8	77.16
HORVU7Hr1G121250.3	Barley	cytosol, golgi, plasma membrane	79.51	77.05
TraesCS7D01G539500.1	Wheat	cytosol, golgi, plasma membrane	78.8	76.63
Os05t0205050-00	Rice	cytosol, peroxisome, plastid	54.77	71.76
KXG31601	Sorghum	golgi, plasma membrane, plastid	70.67	70.92
HORVU5Hr1G085710.3	Barley	cytosol, peroxisome, plasma membrane	79.51	67.57
Os05t0205000-01	Rice	cytosol	20.85	67.05
EES06549	Sorghum	cytoskeleton, cytosol, peroxisome	65.02	64.11
KXG20157	Sorghum	golgi, nucleus, plasma membrane	53.0	51.55
GSMUA_Achr10P...	Banana	cytosol, extracellular, plastid	36.75	41.27
EES07262	Sorghum	cytosol, peroxisome, plasma membrane	40.99	39.06
EER91378	Sorghum	plastid	41.34	38.87
EER89472	Sorghum	cytosol, plasma membrane, plastid	39.58	37.97
OQU79872	Sorghum	cytosol, peroxisome, vacuole	34.63	33.0
EES14542	Sorghum	golgi, peroxisome, vacuole	32.51	31.83
EES00431	Sorghum	plasma membrane	29.68	29.07
KXG24412	Sorghum	vacuole	29.33	26.95

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	EntrezGene:8055735	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	UniProt:C5YUM4
ProteinID:EES19204.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150	GO:GO:0015250	GO:GO:0015267
GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085	InterPro:IPR023271	InterPro:MIP
InterPro:MIP_CS	EnsemblPlants:OQU77604	ProteinID:OQU77604	ProteinID:OQU77604.1	PFAM:PF00230	PRINTS:PR00783
ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF184	EnsemblPlantsGene:SORBI_3009G075900	SUPFAM:SSF81338	TIGRFAMs:TIGR00861
TMHMM:TMhelix	UniParc:UPI0001A88746	RefSeq:XP_002440774.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:-:9905084..9909435

Molecular Weight (calculated)

29494.8 Da

IEP (calculated)

8.212

GRAVY (calculated)

0.547

Length

283 amino acids

Sequence
(BLAST)

001: MAGAEVANGA VHEGGALALE EGRGGDEARC ESSEQDGAGR SRPMFSVPFV QKIVAEVLGT YFLIFAGCAA VAVNLRTGGT VTFPGICIVW GLAVMVMVYS
101: VGHISGAHLN PAVSVAFATC GRFPWKQVPA YAAAQVMGAT AASLTLRLLF GNAREHFFGT VPAGSDVQSL VIEFIISFNL MFVVSGVATD NRAIGELAGL
201: AVGATVLLNV LFAGPVSGAS MNPARTLGPA IVVGRYAGIW VYFAGPICGT VAGAWAYNLI RFTDKPLREI TQTSSFLRSV RRT

Best Arabidopsis Sequence Match ( AT4G18910.1 )
(BLAST)

001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR

Arabidopsis Description

NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [peroxisome,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.