Factsheet for GSMUA_Achr10P27780_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

plastid 3
cytosol 1
plasma membrane 1
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0205000-01	Rice	cytosol	19.05	54.55
GSMUA_Achr9P00710_001	Banana	endoplasmic reticulum, extracellular, vacuole	32.14	43.09
GSMUA_Achr6P14730_001	Banana	plasma membrane	41.27	38.38
OQU77604	Sorghum	plasma membrane	41.27	36.75
Zm00001d037733_P001	Maize	plasma membrane	41.27	36.62
TraesCS3D01G139400.1	Wheat	plasma membrane	35.71	36.29
TraesCS5D01G347600.1	Wheat	cytosol, golgi, plasma membrane	41.27	36.11
TraesCS5B01G342100.1	Wheat	cytosol, golgi, plasma membrane	41.27	36.11
Os01t0202800-00	Rice	cytosol, plasma membrane, plastid	37.7	35.58
TraesCS7B01G476700.1	Wheat	cytosol, golgi, plasma membrane	40.87	35.4
TraesCS5A01G342900.1	Wheat	golgi, peroxisome, plasma membrane	40.48	35.29
HORVU7Hr1G121250.3	Barley	cytosol, golgi, plasma membrane	40.87	35.27
TraesCS7A01G553000.1	Wheat	cytosol, golgi, plasma membrane	40.08	34.83
TraesCS7D01G539500.1	Wheat	cytosol, golgi, plasma membrane	40.08	34.71
KXG31601	Sorghum	golgi, plasma membrane, plastid	38.1	34.04
TraesCS3B01G156700.1	Wheat	plasma membrane	36.11	33.96
HORVU5Hr1G085710.3	Barley	cytosol, peroxisome, plasma membrane	40.87	30.93
TraesCS3A01G139100.3	Wheat	plasma membrane	34.92	30.24
GSMUA_AchrUn_...	Banana	extracellular	26.19	29.6
GSMUA_Achr5P23340_001	Banana	peroxisome	29.76	25.6
GSMUA_Achr10P...	Banana	endoplasmic reticulum, peroxisome, plasma membrane	29.37	25.26
GSMUA_Achr9P27460_001	Banana	cytosol, peroxisome, plasma membrane	29.37	24.58
GSMUA_Achr6P02660_001	Banana	cytosol, endoplasmic reticulum, golgi, mitochondrion	28.57	22.29
Os05t0205050-00	Rice	cytosol, peroxisome, plastid	18.25	21.3
GSMUA_Achr1P04130_001	Banana	plasma membrane	27.38	19.22
GSMUA_Achr4P10230_001	Banana	plastid	21.83	17.52

Protein Annotations

Gene3D:1.20.1080.10	MapMan:35.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr10G27780_001	EnsemblPlants:GSMUA_Achr10P27780_001	EnsemblPlants:GSMUA_Achr10T27780_001	InterPro:IPR023271	UniProt:M0RM02
InterPro:MIP	PFAM:PF00230	PRINTS:PR00783	PANTHER:PTHR19139	PANTHER:PTHR19139:SF184	SUPFAM:SSF81338
TMHMM:TMhelix	UniParc:UPI000295A3E0	SEG:seg	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G27780_001]

Coordinates

chr10:+:30785226..30787872

Molecular Weight (calculated)

28130.3 Da

IEP (calculated)

12.062

GRAVY (calculated)

-0.143

Length

252 amino acids

Sequence
(BLAST)

001: MTVRSKVFIV SWFNSNPDHC RDLGHLLYDI CWVWFGRSES KHRHRHIPRH MLGLGARGHG HGVLPRPRLR RPLQSRRHHR LRHMRKVPVE AGASLRFSSG
101: FGIDHLDRDA EVAVRREAWP VPGNGSRRLR PPVPGSRVHH LQNLMFVISG VATDSRAIGE LAGLVVGATV VVNVLFAGPI SGASMNPARS LGPAIIANRW
201: EGLWVYIVGP ICGTVLGAWA YNLIRFTDRP LLEITNTATA SFLKRLTRKD SA

Best Arabidopsis Sequence Match ( AT5G37820.2 )
(BLAST)

001: MYKSSSTSKF STHQKFQFLF YFSPNKKLTS TFFLKKMTSH GEEIEDEQIS RIEKGNCKDS QGGMETAICS SPSIVCLTQK LIAEMIGTYF IIFSGCGVVV
101: VNVLYGGTIT FPGICVTWGL IVMVMIYSTG HISGAHFNPA VTVTFAVFRR FPWYQVPLYI GAQLTGSLLA SLTLRLMFNV TPKAFFGTTP TDSSGQALVA
201: EIIISFLLMF VISGVATDSR ATGELAGIAV GMTIILNVFV AGPISGASMN PARSLGPAIV MGRYKGIWVY IVGPFVGIFA GGFVYNFMRF TDKPLRELTK
301: SASFLRSVAQ KDNASKSDG

Arabidopsis Description

NIP4;2NOD26-like intrinsic protein 4;2 [Source:TAIR;Acc:AT5G37820]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.