Factsheet for GSMUA_Achr6P02660_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi, cytosol

Predictor Summary:

plastid 2
golgi 1
plasma membrane 1
mitochondrion 2
endoplasmic reticulum 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	endoplasmic reticulum, peroxisome, plasma membrane	78.02	86.01
GSMUA_Achr5P23340_001	Banana	peroxisome	73.06	80.55
GSMUA_Achr9P27460_001	Banana	cytosol, peroxisome, plasma membrane	68.42	73.42
Zm00001d052261_P001	Maize	cytosol, plasma membrane, plastid	41.8	63.98
Zm00001d018037_P001	Maize	cytosol, peroxisome, plasma membrane	56.35	61.69
TraesCS6B01G335900.1	Wheat	golgi, peroxisome, plasma membrane	56.35	61.69
TraesCS6D01G286400.1	Wheat	golgi, peroxisome, plasma membrane	56.04	61.36
TraesCS6A01G307300.1	Wheat	endoplasmic reticulum, golgi, peroxisome	56.04	61.36
Os06t0228200-01	Rice	plasma membrane	56.35	61.07
EER89472	Sorghum	cytosol, plasma membrane, plastid	55.73	61.02
EES07262	Sorghum	cytosol, peroxisome, plasma membrane	56.04	60.94
VIT_14s0108g00700.t01	Wine grape	peroxisome	54.8	60.2
Zm00001d037228_P001	Maize	cytosol, plasma membrane, plastid	54.8	60.2
HORVU7Hr1G038220.1	Barley	endoplasmic reticulum, golgi, peroxisome	55.73	60.0
TraesCS7D01G188800.2	Wheat	plasma membrane	55.42	59.67
TraesCS7B01G092900.1	Wheat	endoplasmic reticulum, golgi, peroxisome	55.11	59.33
TraesCS7A01G187800.1	Wheat	endoplasmic reticulum, golgi, peroxisome	55.11	59.33
Solyc03g013340.2.1	Tomato	cytosol	51.39	58.66
Zm00001d044826_P001	Maize	cytosol, endoplasmic reticulum, plastid	54.49	58.47
PGSC0003DMT400035640	Potato	endoplasmic reticulum, extracellular	32.2	58.43
Os02t0745100-01	Rice	plasma membrane, vacuole	53.56	58.05
PGSC0003DMT400035638	Potato	cytosol, golgi, plasma membrane	22.29	54.55
HORVU0Hr1G017130.2	Barley	endoplasmic reticulum, golgi, peroxisome	24.46	52.67
KRH40096	Soybean	plastid	43.34	47.78
KRH01175	Soybean	plastid	43.34	47.46
GSMUA_Achr9P00710_001	Banana	endoplasmic reticulum, extracellular, vacuole	27.24	46.81
GSMUA_AchrUn_...	Banana	extracellular	32.2	46.64
HORVU6Hr1G075850.4	Barley	nucleus, plasma membrane, vacuole	45.82	46.54
GSMUA_Achr6P14730_001	Banana	plasma membrane	32.82	39.11
HORVU7Hr1G038270.3	Barley	endoplasmic reticulum, golgi, vacuole	39.94	35.25
GSMUA_Achr1P04130_001	Banana	plasma membrane	34.98	31.48
GSMUA_Achr10P...	Banana	cytosol, extracellular, plastid	22.29	28.57
GSMUA_Achr4P10230_001	Banana	plastid	23.84	24.52

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr6G02660_001	EnsemblPlants:GSMUA_Achr6P02660_001	EnsemblPlants:GSMUA_Achr6T02660_001	InterPro:IPR023271	UniProt:M0T3L4
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF142	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI000295B429	:	:

Description

Aquaporin NIP2-1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G02660_001]

Coordinates

chr6:+:1719901..1727663

Molecular Weight (calculated)

34742.1 Da

IEP (calculated)

9.531

GRAVY (calculated)

0.241

Length

323 amino acids

Sequence
(BLAST)

001: MKCLKRSEIF SQPGRTQEDH TLRRSSSWRL EMASQTRPNI SNEIHDIDVV TAQSSVSPRL LHHESLRELF PPFLARKVVA EMISTFLLVF VTCGAGALNK
101: SNSGVVSQLG ASVAGGLIVT VMIYAVGHIS GAHMNPAVTF AFAVSRHFPW IQVPFYMCAQ ISGAMVASFV LRELLHPITN LGTTTPSDTA AKALVMETVV
201: TFCMMFVTSA VATDTKAVGE LAGLAVGSSV CITSILAGPV SGGSMNPART LGPAVASRNY QSLWVYFVGP VLGTVSGSFS YSFIRMTEKQ QHTTAAQKLS
301: SFKLRRLQSQ EMASPTSNAF ENV

Best Arabidopsis Sequence Match ( AT5G37810.1 )
(BLAST)

001: MSSHSDEIEE EQISRIEKGK GKDCQGGIET VICTSPSIVC LTQKLIAEMI GTYFIVFSGC GVVVVNVLYG GTITFPGICV TWGLIVMVMI YSTGHISGAH
101: FNPAVTVTFA IFRRFPWHQV PLYIGAQFAG SLLASLTLRL MFKVTPEAFF GTTPADSPAR ALVAEIIISF LLMFVISGVA TDNRAVGELA GIAVGMTIMV
201: NVFVAGPISG ASMNPARSLG PALVMGVYKH IWVYIVGPVL GVISGGFVYN LIRFTDKPLR ELTKSASFLR AVSPSHKGSS SKT

Arabidopsis Description

NIP4-1Putative aquaporin NIP4-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIZ9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.