Factsheet for GSMUA_Achr9P27460_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
plastid 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	endoplasmic reticulum, peroxisome, plasma membrane	73.09	75.09
GSMUA_Achr5P23340_001	Banana	peroxisome	70.1	72.01
GSMUA_Achr6P02660_001	Banana	cytosol, endoplasmic reticulum, golgi, mitochondrion	73.42	68.42
Zm00001d052261_P001	Maize	cytosol, plasma membrane, plastid	44.19	63.03
Zm00001d018037_P001	Maize	cytosol, peroxisome, plasma membrane	59.14	60.34
TraesCS6B01G335900.1	Wheat	golgi, peroxisome, plasma membrane	58.47	59.66
EES07262	Sorghum	cytosol, peroxisome, plasma membrane	58.8	59.6
TraesCS6D01G286400.1	Wheat	golgi, peroxisome, plasma membrane	58.14	59.32
Os02t0745100-01	Rice	plasma membrane, vacuole	58.47	59.06
TraesCS6A01G307300.1	Wheat	endoplasmic reticulum, golgi, peroxisome	57.81	58.98
Os06t0228200-01	Rice	plasma membrane	58.14	58.72
EER89472	Sorghum	cytosol, plasma membrane, plastid	57.48	58.64
Zm00001d037228_P001	Maize	cytosol, plasma membrane, plastid	56.48	57.82
VIT_14s0108g00700.t01	Wine grape	peroxisome	56.48	57.82
Zm00001d044826_P001	Maize	cytosol, endoplasmic reticulum, plastid	57.48	57.48
HORVU7Hr1G038220.1	Barley	endoplasmic reticulum, golgi, peroxisome	57.14	57.33
TraesCS7D01G188800.2	Wheat	plasma membrane	56.81	57.0
HORVU0Hr1G017130.2	Barley	endoplasmic reticulum, golgi, peroxisome	28.24	56.67
TraesCS7B01G092900.1	Wheat	endoplasmic reticulum, golgi, peroxisome	56.48	56.67
TraesCS7A01G187800.1	Wheat	endoplasmic reticulum, golgi, peroxisome	56.48	56.67
Solyc03g013340.2.1	Tomato	cytosol	50.83	54.06
PGSC0003DMT400035640	Potato	endoplasmic reticulum, extracellular	31.89	53.93
PGSC0003DMT400035638	Potato	cytosol, golgi, plasma membrane	22.26	50.76
KRH40096	Soybean	plastid	46.84	48.12
KRH01175	Soybean	plastid	46.84	47.8
HORVU6Hr1G075850.4	Barley	nucleus, plasma membrane, vacuole	49.17	46.54
GSMUA_AchrUn_...	Banana	extracellular	33.89	45.74
GSMUA_Achr9P00710_001	Banana	endoplasmic reticulum, extracellular, vacuole	28.24	45.21
GSMUA_Achr6P14730_001	Banana	plasma membrane	35.55	39.48
HORVU7Hr1G038270.3	Barley	endoplasmic reticulum, golgi, vacuole	42.86	35.25
GSMUA_Achr1P04130_001	Banana	plasma membrane	37.21	31.2
GSMUA_Achr10P...	Banana	cytosol, extracellular, plastid	24.58	29.37
GSMUA_Achr4P10230_001	Banana	plastid	23.59	22.61

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr9G27460_001	EnsemblPlants:GSMUA_Achr9P27460_001	EnsemblPlants:GSMUA_Achr9T27460_001	InterPro:IPR023271	UniProt:M0U403
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF142	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI000294B10A	SEG:seg	:

Description

Aquaporin NIP2-1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G27460_001]

Coordinates

chr9:-:31648347..31651036

Molecular Weight (calculated)

31933.7 Da

IEP (calculated)

8.704

GRAVY (calculated)

0.272

Length

301 amino acids

Sequence
(BLAST)

001: MASSHVRPNN SNEIHDIDVV TAQTLTTPSF FDPPRVHRRR NLKELFPPFL PRKVVSEMIA TFLLVFVTCG AGALNKNNPG VVSQLGQSVA GGLIVTVMIY
101: AVGHISGAHM NPAVTLAFAV ARHFPWIQVP FYMLAQIAGS TTASYILREL LDPIHDLGTT TPSHTAAKAL VAEIVVTFNM MFVTAAVATD TKAVGELAGL
201: AVGSAVCITS ILAGPISGGS MNPARTLGPA LASNKFDSLW VYFVGPPVGT VAGALAYSFI RLDEHSLSSQ KDSQKSPSLK MRRVQSQDMA SPTNDAFESG
301: V

Best Arabidopsis Sequence Match ( AT5G37820.2 )
(BLAST)

001: MYKSSSTSKF STHQKFQFLF YFSPNKKLTS TFFLKKMTSH GEEIEDEQIS RIEKGNCKDS QGGMETAICS SPSIVCLTQK LIAEMIGTYF IIFSGCGVVV
101: VNVLYGGTIT FPGICVTWGL IVMVMIYSTG HISGAHFNPA VTVTFAVFRR FPWYQVPLYI GAQLTGSLLA SLTLRLMFNV TPKAFFGTTP TDSSGQALVA
201: EIIISFLLMF VISGVATDSR ATGELAGIAV GMTIILNVFV AGPISGASMN PARSLGPAIV MGRYKGIWVY IVGPFVGIFA GGFVYNFMRF TDKPLRELTK
301: SASFLRSVAQ KDNASKSDG

Arabidopsis Description

NIP4;2NOD26-like intrinsic protein 4;2 [Source:TAIR;Acc:AT5G37820]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.