Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 3
- endoplasmic reticulum 2
- plasma membrane 2
- extracellular 2
- vacuole 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400078337 | Potato | plasma membrane | 71.81 | 49.63 |
| Solyc05g008080.1.1 | Tomato | plasma membrane | 70.74 | 48.9 |
| GSMUA_Achr6P14730_001 | Banana | plasma membrane | 69.15 | 47.97 |
| KRH50367 | Soybean | plasma membrane | 59.04 | 42.37 |
| GSMUA_AchrUn_... | Banana | extracellular | 44.68 | 37.67 |
| GSMUA_Achr10P... | Banana | cytosol, extracellular, plastid | 43.09 | 32.14 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, peroxisome, plasma membrane | 47.87 | 30.72 |
| GSMUA_Achr5P23340_001 | Banana | peroxisome | 47.87 | 30.72 |
| GSMUA_Achr9P27460_001 | Banana | cytosol, peroxisome, plasma membrane | 45.21 | 28.24 |
| GSMUA_Achr6P02660_001 | Banana | cytosol, endoplasmic reticulum, golgi, mitochondrion | 46.81 | 27.24 |
| GSMUA_Achr1P04130_001 | Banana | plasma membrane | 44.15 | 23.12 |
| GSMUA_Achr4P10230_001 | Banana | plastid | 32.45 | 19.43 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.1 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | EnsemblPlantsGene:GSMUA_Achr9G00710_001 | EnsemblPlants:GSMUA_Achr9P00710_001 | EnsemblPlants:GSMUA_Achr9T00710_001 | InterPro:IPR023271 | UniProt:M0TWC8 |
| InterPro:MIP | PFAM:PF00230 | PRINTS:PR00783 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF185 | SUPFAM:SSF81338 |
| TMHMM:TMhelix | UniParc:UPI000295167B | : | : | : | : |
Description
Probable aquaporin NIP4-2 [Source:GMGC_GENE;Acc:GSMUA_Achr9G00710_001]
Coordinates
chr9:+:545578..546827
Molecular Weight (calculated)
20087.9 Da
IEP (calculated)
10.217
GRAVY (calculated)
0.603
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MVYSVGHISG AHFNPAVTTT FTILKQFPLK QLPLYMVAQL VGAILASGAV YLLFDPKAEH FYGTTPVGSA VQSFVLEIII SFLLMFVISG VATDTRAIGE
101: LAGIAVGSTI LLNVLVAGPI SGASMNPARS IGPAIVMRNY KAIWAYVLGP MIGTLAGGFT YNLVRYTDKP LREITKSSSF LKSVSRNR
101: LAGIAVGSTI LLNVLVAGPI SGASMNPARS IGPAIVMRNY KAIWAYVLGP MIGTLAGGFT YNLVRYTDKP LREITKSSSF LKSVSRNR
001: MYKSSSTSKF STHQKFQFLF YFSPNKKLTS TFFLKKMTSH GEEIEDEQIS RIEKGNCKDS QGGMETAICS SPSIVCLTQK LIAEMIGTYF IIFSGCGVVV
101: VNVLYGGTIT FPGICVTWGL IVMVMIYSTG HISGAHFNPA VTVTFAVFRR FPWYQVPLYI GAQLTGSLLA SLTLRLMFNV TPKAFFGTTP TDSSGQALVA
201: EIIISFLLMF VISGVATDSR ATGELAGIAV GMTIILNVFV AGPISGASMN PARSLGPAIV MGRYKGIWVY IVGPFVGIFA GGFVYNFMRF TDKPLRELTK
301: SASFLRSVAQ KDNASKSDG
101: VNVLYGGTIT FPGICVTWGL IVMVMIYSTG HISGAHFNPA VTVTFAVFRR FPWYQVPLYI GAQLTGSLLA SLTLRLMFNV TPKAFFGTTP TDSSGQALVA
201: EIIISFLLMF VISGVATDSR ATGELAGIAV GMTIILNVFV AGPISGASMN PARSLGPAIV MGRYKGIWVY IVGPFVGIFA GGFVYNFMRF TDKPLRELTK
301: SASFLRSVAQ KDNASKSDG
Arabidopsis Description
NIP4;2NOD26-like intrinsic protein 4;2 [Source:TAIR;Acc:AT5G37820]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.