Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72002 | Canola | plastid | 28.25 | 74.12 |
| CDY51581 | Canola | plastid | 22.42 | 69.44 |
| CDY16269 | Canola | plastid | 21.97 | 68.06 |
| Solyc08g013730.2.1 | Tomato | cytosol, plasma membrane, plastid | 88.79 | 67.12 |
| PGSC0003DMT400014852 | Potato | cytosol, plasma membrane, plastid | 88.34 | 66.55 |
| VIT_02s0025g03260.t01 | Wine grape | plastid | 88.34 | 66.11 |
| HORVU3Hr1G014440.3 | Barley | golgi, mitochondrion, plasma membrane | 73.99 | 63.95 |
| CDY25253 | Canola | plasma membrane | 84.3 | 62.46 |
| CDX94261 | Canola | plasma membrane | 84.3 | 62.46 |
| Bra033181.1-P | Field mustard | plasma membrane | 84.3 | 62.46 |
| EER91378 | Sorghum | plastid | 83.86 | 62.13 |
| KRH35064 | Soybean | plastid | 82.96 | 61.87 |
| AT4G10380.1 | Thale cress | cytosol | 84.3 | 61.84 |
| TraesCS1A01G177500.1 | Wheat | plastid | 82.51 | 61.33 |
| Zm00001d032461_P001 | Maize | plastid | 82.96 | 61.26 |
| TraesCS1D01G176000.1 | Wheat | plastid | 82.06 | 61.2 |
| Bra000710.1-P | Field mustard | plasma membrane | 82.51 | 61.13 |
| CDY05100 | Canola | plasma membrane | 82.51 | 61.13 |
| CDX90757 | Canola | plasma membrane | 82.51 | 61.13 |
| TraesCS1B01G202700.1 | Wheat | plastid | 81.61 | 61.07 |
| Os10t0513200-01 | Rice | plasma membrane | 84.3 | 60.45 |
| CDX67591 | Canola | plasma membrane | 81.17 | 60.13 |
| KRG91709 | Soybean | plastid | 66.37 | 58.04 |
| GSMUA_Achr1P04130_001 | Banana | plasma membrane | 90.13 | 55.99 |
| GSMUA_Achr9P00710_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 37.67 | 44.68 |
| HORVU1Hr1G047100.3 | Barley | plastid | 69.06 | 41.96 |
| GSMUA_Achr6P14730_001 | Banana | plasma membrane | 47.53 | 39.11 |
| GSMUA_Achr5P23340_001 | Banana | peroxisome | 44.84 | 34.13 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, peroxisome, plasma membrane | 44.84 | 34.13 |
| GSMUA_Achr9P27460_001 | Banana | cytosol, peroxisome, plasma membrane | 45.74 | 33.89 |
| GSMUA_Achr6P02660_001 | Banana | cytosol, endoplasmic reticulum, golgi, mitochondrion | 46.64 | 32.2 |
| GSMUA_Achr10P... | Banana | cytosol, extracellular, plastid | 29.6 | 26.19 |
| GSMUA_Achr4P10230_001 | Banana | plastid | 26.01 | 18.47 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.1 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | EnsemblPlantsGene:GSMUA_AchrUn_randomG27360_001 | EnsemblPlants:GSMUA_AchrUn_randomP27360_001 | EnsemblPlants:GSMUA_AchrUn_randomT27360_001 | InterPro:IPR023271 | UniProt:M0UCU4 |
| InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 |
| PANTHER:PTHR19139:SF102 | SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI000294A827 | SEG:seg | : |
Description
Probable aquaporin NIP5-1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG27360_001]
Coordinates
chrchrUn_random:+:133787650..133788510
Molecular Weight (calculated)
22859.0 Da
IEP (calculated)
9.516
GRAVY (calculated)
0.785
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: IGAEFVGTFI LIFGATAAPI VNQKYNGAEA LIGNAACAGL AVMIVILSTG HISGAHLNPS LTIAFAALRH FPWSHVPAYV VAQVSASICA SFALKGVFHP
101: FLSGGVTVPS VSTAQAFFIE FVITFNLLFV VTAVATDTRA VGELAGIAVG ATVMLNILIA GPSSGGSMNP VRTLGPAVAA GNYKQIWIYL VAPTAGAVAG
201: AAVYTAVKLK GDDGELPRRS FRR
101: FLSGGVTVPS VSTAQAFFIE FVITFNLLFV VTAVATDTRA VGELAGIAVG ATVMLNILIA GPSSGGSMNP VRTLGPAVAA GNYKQIWIYL VAPTAGAVAG
201: AAVYTAVKLK GDDGELPRRS FRR
001: MAPPEAEVGA VMVMAPPTPG TPGTPGGPLI TGMRVDSMSF DHRKPTPRCK CLPVMGSTWG QHDTCFTDFP SPDVSLTRKL GAEFVGTFIL IFTATAGPIV
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR
Arabidopsis Description
NIP5-1At4g10380 [Source:UniProtKB/TrEMBL;Acc:A3KPG0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.