Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90757 | Canola | plasma membrane | 98.01 | 98.01 |
| CDY72002 | Canola | plastid | 27.24 | 96.47 |
| CDY25253 | Canola | plasma membrane | 96.01 | 96.01 |
| CDX94261 | Canola | plasma membrane | 95.68 | 95.68 |
| CDX67591 | Canola | plasma membrane | 94.68 | 94.68 |
| CDY51581 | Canola | plastid | 22.26 | 93.06 |
| AT4G10380.1 | Thale cress | cytosol | 93.69 | 92.76 |
| CDY16269 | Canola | plastid | 21.93 | 91.67 |
| GSMUA_AchrUn_... | Banana | extracellular | 61.13 | 82.51 |
| VIT_02s0025g03260.t01 | Wine grape | plastid | 79.73 | 80.54 |
| Solyc08g013730.2.1 | Tomato | cytosol, plasma membrane, plastid | 78.41 | 80.0 |
| PGSC0003DMT400014852 | Potato | cytosol, plasma membrane, plastid | 78.41 | 79.73 |
| KRH35064 | Soybean | plastid | 72.09 | 72.58 |
| EER91378 | Sorghum | plastid | 71.1 | 71.1 |
| KRG91709 | Soybean | plastid | 60.13 | 70.98 |
| Zm00001d032461_P001 | Maize | plastid | 70.76 | 70.53 |
| TraesCS1A01G177500.1 | Wheat | plastid | 69.1 | 69.33 |
| TraesCS1D01G176000.1 | Wheat | plastid | 68.77 | 69.23 |
| TraesCS1B01G202700.1 | Wheat | plastid | 68.44 | 69.13 |
| Os10t0513200-01 | Rice | plasma membrane | 70.1 | 67.85 |
| CDY39946 | Canola | cytosol, peroxisome, plasma membrane | 66.45 | 65.57 |
| CDX87340 | Canola | cytosol, peroxisome, plasma membrane | 66.11 | 65.25 |
| CDY53224 | Canola | cytosol, peroxisome, plasma membrane | 66.11 | 65.25 |
| CDY66949 | Canola | cytosol, peroxisome, plasma membrane | 65.12 | 64.26 |
| HORVU3Hr1G014440.3 | Barley | golgi, mitochondrion, plasma membrane | 53.82 | 62.79 |
| GSMUA_Achr1P04130_001 | Banana | plasma membrane | 73.75 | 61.84 |
| HORVU1Hr1G047100.3 | Barley | plastid | 59.8 | 49.05 |
| CDY71538 | Canola | extracellular, plasma membrane, vacuole | 35.22 | 46.49 |
| CDX99689 | Canola | extracellular | 25.58 | 45.56 |
| CDX74558 | Canola | plasma membrane | 41.86 | 44.52 |
| CDY01700 | Canola | plasma membrane | 41.53 | 44.17 |
| CDY65403 | Canola | plasma membrane | 39.53 | 42.05 |
| CDX99688 | Canola | plasma membrane | 38.87 | 41.34 |
| CDY41749 | Canola | plasma membrane | 38.54 | 39.19 |
| CDY35532 | Canola | endoplasmic reticulum, extracellular, vacuole | 35.88 | 38.43 |
| CDX98596 | Canola | cytosol, peroxisome, plasma membrane | 37.54 | 37.92 |
| CDY01565 | Canola | cytosol, peroxisome, plasma membrane | 37.54 | 37.92 |
| CDX99411 | Canola | cytosol, peroxisome, plasma membrane | 36.88 | 37.37 |
| CDX78905 | Canola | cytosol, peroxisome, plasma membrane | 36.88 | 37.37 |
| CDX84321 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 34.88 | 36.71 |
| CDX84320 | Canola | extracellular, plasma membrane, plastid, vacuole | 34.88 | 36.71 |
| CDY17241 | Canola | cytosol, plasma membrane, plastid, vacuole | 34.55 | 36.36 |
| CDY17243 | Canola | extracellular, plasma membrane, plastid, vacuole | 34.55 | 36.36 |
| CDX84114 | Canola | plasma membrane | 39.87 | 35.93 |
| CDY05231 | Canola | plasma membrane | 30.23 | 33.46 |
| CDY27709 | Canola | plasma membrane | 30.23 | 33.46 |
| CDY29922 | Canola | peroxisome, plasma membrane, vacuole | 35.55 | 32.62 |
| CDY35531 | Canola | vacuole | 33.22 | 31.95 |
| CDY29921 | Canola | vacuole | 33.22 | 31.75 |
| CDY35528 | Canola | cytosol | 13.29 | 29.63 |
| CDY69767 | Canola | plasma membrane | 24.25 | 27.34 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.1 | GO:A0A078ET33 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | EnsemblPlants:CDY05100 |
| ProteinID:CDY05100 | ProteinID:CDY05100.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00119864001 | InterPro:IPR023271 |
| InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 |
| PANTHER:PTHR19139:SF159 | SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI0004EDC269 | SEG:seg | : |
Description
BnaC03g28980D
Coordinates
chrLK031959:-:615480..622343
Molecular Weight (calculated)
31118.0 Da
IEP (calculated)
8.493
GRAVY (calculated)
0.520
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPPEAEMGA VAVTAPPTPG TPGGPLITGM RVDSMSFDHR KPIPPCKCLP VMGNPWGQHD TCFTDFPTPG VSLTRKLGAE FVGTFILIFT ATAGPIVNQK
101: YDGAETLIGN AACAGLAVMI IILSTGHISG AHLNPSLTIA FAALRHFPWA HVPAYIAAQV SASVCASFAL KAVFHPFMSG GVTVPSVSVG QAFALEFIIS
201: FILLFVVTAV ATDTRAVGEL AGIAVGATVM LNILVAGPST GASMNPVRTL GPALASGNYR SLWVYLVAPT LGAISGAAVY TGVKLNDSAT DPPRQVRSFR
301: R
101: YDGAETLIGN AACAGLAVMI IILSTGHISG AHLNPSLTIA FAALRHFPWA HVPAYIAAQV SASVCASFAL KAVFHPFMSG GVTVPSVSVG QAFALEFIIS
201: FILLFVVTAV ATDTRAVGEL AGIAVGATVM LNILVAGPST GASMNPVRTL GPALASGNYR SLWVYLVAPT LGAISGAAVY TGVKLNDSAT DPPRQVRSFR
301: R
001: MAPPEAEVGA VMVMAPPTPG TPGTPGGPLI TGMRVDSMSF DHRKPTPRCK CLPVMGSTWG QHDTCFTDFP SPDVSLTRKL GAEFVGTFIL IFTATAGPIV
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR
Arabidopsis Description
NIP5-1At4g10380 [Source:UniProtKB/TrEMBL;Acc:A3KPG0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.