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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, peroxisome, vacuole

Predictor Summary:
  • plastid 1
  • plasma membrane 1
  • mitochondrion 1
  • vacuole 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome, plasma membrane, vacuole
Any Predictor:peroxisome, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:vacuole
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY35532 Canola endoplasmic reticulum, extracellular, vacuole 64.94 75.8
CDY41749 Canola plasma membrane 56.71 62.84
CDY35531 Canola vacuole 58.84 61.66
CDY29921 Canola vacuole 59.15 61.59
CDX84114 Canola plasma membrane 62.2 61.08
AT1G31885.1 Thale cress vacuole 58.23 59.13
CDY71538 Canola extracellular, plasma membrane, vacuole 32.62 46.93
CDY35528 Canola cytosol 19.21 46.67
CDX84320 Canola extracellular, plasma membrane, plastid, vacuole 38.41 44.06
CDX84321 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 38.41 44.06
CDY17243 Canola extracellular, plasma membrane, plastid, vacuole 38.41 44.06
CDY17241 Canola cytosol, plasma membrane, plastid, vacuole 38.11 43.71
CDY65403 Canola plasma membrane 36.59 42.4
CDY01700 Canola plasma membrane 36.28 42.05
CDX74558 Canola plasma membrane 36.28 42.05
CDX99688 Canola plasma membrane 36.28 42.05
CDX78905 Canola cytosol, peroxisome, plasma membrane 37.8 41.75
CDY01565 Canola cytosol, peroxisome, plasma membrane 37.2 40.94
CDX98596 Canola cytosol, peroxisome, plasma membrane 37.2 40.94
CDX99689 Canola extracellular 21.04 40.83
CDX99411 Canola cytosol, peroxisome, plasma membrane 36.59 40.4
CDY72002 Canola plastid 10.06 38.82
TraesCS7A01G355000.1 Wheat peroxisome 32.93 38.71
TraesCS7B01G272700.1 Wheat plasma membrane 32.93 38.71
Solyc06g073590.2.1 Tomato endoplasmic reticulum, peroxisome, plasma membrane 40.55 38.55
TraesCS7D01G367800.1 Wheat golgi, peroxisome, plasma membrane 32.62 38.35
PGSC0003DMT400015246 Potato endoplasmic reticulum, peroxisome, plasma membrane 39.33 37.18
KXG20157 Sorghum golgi, nucleus, plasma membrane 32.32 36.43
Os06t0552700-01 Rice cytosol, peroxisome, plastid 30.18 36.26
CDX67591 Canola plasma membrane 32.93 35.88
CDY25253 Canola plasma membrane 32.93 35.88
CDX94261 Canola plasma membrane 32.93 35.88
CDY05100 Canola plasma membrane 32.62 35.55
CDX90757 Canola plasma membrane 32.62 35.55
CDY66949 Canola cytosol, peroxisome, plasma membrane 32.32 34.75
CDY51581 Canola plastid 7.62 34.72
CDY16269 Canola plastid 7.62 34.72
CDY27709 Canola plasma membrane 28.66 34.56
CDY05231 Canola plasma membrane 28.66 34.56
CDY39946 Canola cytosol, peroxisome, plasma membrane 32.01 34.43
CDX87340 Canola cytosol, peroxisome, plasma membrane 32.01 34.43
CDY53224 Canola cytosol, peroxisome, plasma membrane 31.71 34.1
PGSC0003DMT400073240 Potato cytosol, plasma membrane, vacuole 18.6 33.7
CDY69767 Canola plasma membrane 26.22 32.21
Solyc02g071910.1.1 Tomato endoplasmic reticulum, extracellular 22.56 32.03
Zm00001d046303_P001 Maize golgi, peroxisome, plasma membrane 30.18 31.23
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.1GO:A0A078GXI8UniProt:A0A078GXI8InterPro:Aquaporin-likeInterPro:Aquaporin_transptr
EnsemblPlants:CDY29922ProteinID:CDY29922ProteinID:CDY29922.1GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0016021GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00044398001InterPro:IPR023271InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783
ScanProsite:PS00221PANTHER:PTHR19139PANTHER:PTHR19139:SF155SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelix
UniParc:UPI0004EC2047SEG:seg::::
Description
BnaC05g29140DBnaC05g29140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GXI8]
Coordinates
chrLK032246:+:152382..155729
Molecular Weight (calculated)
35416.5 Da
IEP (calculated)
10.285
GRAVY (calculated)
0.036
Length
328 amino acids
Sequence
(BLAST)
001: MANITAQTQT ANLDIEDGRS GGGSRSQDSP RPPIFISFVQ KLFGEFVGTF SLVFAGCSAI VVNDTYGKPV TLPGIALTWG LSVMVMTYSI GHISGAHFNP
101: AITIALASSR KFPLKQVPGY IAAQVLGSTL AIESLRLLFN LNNNGCSLKG AIYVGTHPSS SNTAAFVVEF FATFNLLFVI SAVATDKRAN RSFAGLAIGA
201: TVVLDILFGG PISGASMNPA RSLAPAYIWG CYKDLWIYIV APVVGALTAD EYGANGATDS RRQEPAKTML KKSSLAGDQS PNNGKRGRKK IPANKSRHRS
301: LSESFRDRKE RERAENFNNW LFRYWVFV
Best Arabidopsis Sequence Match ( AT1G31885.1 )
(BLAST)
001: MAEISDITTQ TQTVVLDIEN YQSIDDSRSS DLSAPLVSVS FVQKLIGEFV GTFTMIFAGC SAIVVNETYG KPVTLPGIAL VWGLVVTVMI YSIGHVSGAH
101: FNPAVSIAFA SSKKFPFNQV PGYIAAQLLG STLAAAVLRL VFHLDDDVCS LKGDVYVGTY PSNSNTTSFV MEFIATFNLM FVISAVATDK RATGSFAGIA
201: IGATIVLDIL FSGPISGASM NPARSLGPAL IWGCYKDLWL YIVSPVIGAL SGAWTYGLLR STKKSYSEII RPNCNKVSSR DRQEASQDEI CVLRVVDPAN
301: QNYFICSSPT DINGKCNVTC KLA
Arabidopsis Description
NIP3-1Aquaporin NIP3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6T0]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.