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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra028151.1-P Field mustard plasma membrane 100.0 100.0
CDY01700 Canola plasma membrane 99.29 99.29
CDY71538 Canola extracellular, plasma membrane, vacuole 69.26 85.96
CDY65403 Canola plasma membrane 82.33 82.33
AT5G37810.1 Thale cress plasma membrane 82.33 82.33
CDX99688 Canola plasma membrane 81.27 81.27
CDX99689 Canola extracellular 47.0 78.7
PGSC0003DMT400078773 Potato cytoskeleton, cytosol, plasma membrane 66.78 70.79
Solyc02g091420.2.1 Tomato plasma membrane 65.02 68.91
KRH15118 Soybean plasma membrane 58.3 63.22
KRH73019 Soybean cytosol, peroxisome, plasma membrane 58.3 63.22
CDY69767 Canola plasma membrane 56.54 59.93
CDY72002 Canola plastid 16.25 54.12
CDY01565 Canola cytosol, peroxisome, plasma membrane 51.59 48.99
CDX98596 Canola cytosol, peroxisome, plasma membrane 51.24 48.66
CDY51581 Canola plastid 12.37 48.61
CDY16269 Canola plastid 12.37 48.61
CDX99411 Canola cytosol, peroxisome, plasma membrane 50.88 48.48
CDX78905 Canola cytosol, peroxisome, plasma membrane 50.88 48.48
Solyc02g063310.2.1 Tomato cytosol, extracellular, vacuole 23.32 48.18
CDY41749 Canola plasma membrane 45.94 43.92
CDY35532 Canola endoplasmic reticulum, extracellular, vacuole 42.76 43.06
CDX67591 Canola plasma membrane 45.58 42.86
CDY05100 Canola plasma membrane 44.52 41.86
CDX90757 Canola plasma membrane 44.52 41.86
CDY25253 Canola plasma membrane 44.17 41.53
CDX94261 Canola plasma membrane 44.17 41.53
CDY17241 Canola cytosol, plasma membrane, plastid, vacuole 40.99 40.56
CDX84320 Canola extracellular, plasma membrane, plastid, vacuole 40.64 40.21
CDY39946 Canola cytosol, peroxisome, plasma membrane 43.11 40.0
CDX87340 Canola cytosol, peroxisome, plasma membrane 43.11 40.0
CDX84321 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 40.28 39.86
CDY17243 Canola extracellular, plasma membrane, plastid, vacuole 40.28 39.86
CDY53224 Canola cytosol, peroxisome, plasma membrane 42.76 39.67
CDX84114 Canola plasma membrane 46.64 39.52
VIT_14s0006g01560.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 16.25 39.32
CDY66949 Canola cytosol, peroxisome, plasma membrane 42.05 39.02
CDY35531 Canola vacuole 42.05 38.02
CDY29921 Canola vacuole 42.05 37.78
CDY29922 Canola peroxisome, plasma membrane, vacuole 42.05 36.28
CDY35528 Canola cytosol 16.96 35.56
CDY05231 Canola plasma membrane 32.51 33.82
CDY27709 Canola plasma membrane 32.51 33.82
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.1GO:A0A078CHV0InterPro:Aquaporin-likeInterPro:Aquaporin_transptrEnsemblPlants:CDX74558
ProteinID:CDX74558ProteinID:CDX74558.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00114486001InterPro:IPR023271
InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139
PANTHER:PTHR19139:SF185SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixUniParc:UPI00025443D5SEG:seg
Description
BnaA04g08310D
Coordinates
chrLK031801:-:1388343..1389802
Molecular Weight (calculated)
30241.4 Da
IEP (calculated)
8.207
GRAVY (calculated)
0.588
Length
283 amino acids
Sequence
(BLAST)
001: MTSHVEEIEE EEISKIEKGK GKDCHRGIET VICTSPTTVC LTQKLIAEMI GTYFLIFAGC GVVVVNVLYG GTVTFPGICV TWGLIVMVMI YSTGHISGAH
101: FNPAVTLTFA VFRRFPWYQV PLYIGAQLTG SLLGSLTLKL MFHVTPAAYF GTIPSDSAAQ ALAAEIIISF LLMFVISGVA TDNRAVGELA GIAVGMTIML
201: NVFVAGPVSG ASMNPARSLG PAIVMGVYDG LWIYIVGPLV GIMAGGFVYN LIRFTDKPLK ELTRNGSFLR SASPKHKTST SKS
Best Arabidopsis Sequence Match ( AT5G37810.1 )
(BLAST)
001: MSSHSDEIEE EQISRIEKGK GKDCQGGIET VICTSPSIVC LTQKLIAEMI GTYFIVFSGC GVVVVNVLYG GTITFPGICV TWGLIVMVMI YSTGHISGAH
101: FNPAVTVTFA IFRRFPWHQV PLYIGAQFAG SLLASLTLRL MFKVTPEAFF GTTPADSPAR ALVAEIIISF LLMFVISGVA TDNRAVGELA GIAVGMTIMV
201: NVFVAGPISG ASMNPARSLG PALVMGVYKH IWVYIVGPVL GVISGGFVYN LIRFTDKPLR ELTKSASFLR AVSPSHKGSS SKT
Arabidopsis Description
NIP4-1Putative aquaporin NIP4-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIZ9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.