Factsheet for Bra028151.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74558	Canola	plasma membrane	100.0	100.0
Bra025437.1-P	Field mustard	plasma membrane	82.69	84.78
AT5G37810.1	Thale cress	plasma membrane	82.33	82.33
Bra025436.1-P	Field mustard	plastid	55.83	80.2
Bra025435.1-P	Field mustard	plastid	44.88	77.44
PGSC0003DMT400078773	Potato	cytoskeleton, cytosol, plasma membrane	66.78	70.79
Solyc02g091420.2.1	Tomato	plasma membrane	65.02	68.91
KRH73019	Soybean	cytosol, peroxisome, plasma membrane	58.3	63.22
KRH15118	Soybean	plasma membrane	58.3	63.22
Bra012567.1-P	Field mustard	cytosol, peroxisome, plasma membrane	51.59	48.99
Bra013361.1-P	Field mustard	cytosol, peroxisome, plasma membrane	50.88	48.48
Solyc02g063310.2.1	Tomato	cytosol, extracellular, vacuole	23.32	48.18
Bra000710.1-P	Field mustard	plasma membrane	44.52	41.86
Bra033181.1-P	Field mustard	plasma membrane	44.17	41.53
Bra035520.1-P	Field mustard	plasma membrane	46.64	40.87
Bra005430.1-P	Field mustard	cytosol, plasma membrane, plastid, vacuole	40.99	40.42
Bra005428.1-P	Field mustard	extracellular, plasma membrane, plastid, vacuole	40.64	40.21
Bra035156.1-P	Field mustard	cytosol, peroxisome, plasma membrane	43.11	40.0
Bra008442.1-P	Field mustard	cytosol, peroxisome, plasma membrane	43.11	40.0
VIT_14s0006g01560.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	16.25	39.32
Bra033867.1-P	Field mustard	vacuole	45.58	38.28
Bra020777.1-P	Field mustard	plasma membrane	32.51	33.82

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:Bra028151	EnsemblPlants:Bra028151.1
EnsemblPlants:Bra028151.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	UniProt:M4EH86
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF185	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI00025443D5	SEG:seg

Description

AT5G37810 (E=4e-112) NIP4;1, NLM4 | NIP4;1 (NOD26-LIKE INTRINSIC PROTEIN 4;1); water channel

Coordinates

chrA04:+:6195773..6197233

Molecular Weight (calculated)

30241.4 Da

IEP (calculated)

8.207

GRAVY (calculated)

0.588

Length

283 amino acids

Sequence
(BLAST)

001: MTSHVEEIEE EEISKIEKGK GKDCHRGIET VICTSPTTVC LTQKLIAEMI GTYFLIFAGC GVVVVNVLYG GTVTFPGICV TWGLIVMVMI YSTGHISGAH
101: FNPAVTLTFA VFRRFPWYQV PLYIGAQLTG SLLGSLTLKL MFHVTPAAYF GTIPSDSAAQ ALAAEIIISF LLMFVISGVA TDNRAVGELA GIAVGMTIML
201: NVFVAGPVSG ASMNPARSLG PAIVMGVYDG LWIYIVGPLV GIMAGGFVYN LIRFTDKPLK ELTRNGSFLR SASPKHKTST SKS

Best Arabidopsis Sequence Match ( AT5G37810.1 )
(BLAST)

001: MSSHSDEIEE EQISRIEKGK GKDCQGGIET VICTSPSIVC LTQKLIAEMI GTYFIVFSGC GVVVVNVLYG GTITFPGICV TWGLIVMVMI YSTGHISGAH
101: FNPAVTVTFA IFRRFPWHQV PLYIGAQFAG SLLASLTLRL MFKVTPEAFF GTTPADSPAR ALVAEIIISF LLMFVISGVA TDNRAVGELA GIAVGMTIMV
201: NVFVAGPISG ASMNPARSLG PALVMGVYKH IWVYIVGPVL GVISGGFVYN LIRFTDKPLR ELTKSASFLR AVSPSHKGSS SKT

Arabidopsis Description

NIP4-1Putative aquaporin NIP4-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIZ9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.