Factsheet for Bra033867.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 2
mitochondrion 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35531	Canola	vacuole	92.88	100.0
Bra035520.1-P	Field mustard	plasma membrane	77.15	80.5
AT1G31885.1	Thale cress	vacuole	74.48	77.71
Bra025436.1-P	Field mustard	plastid	29.97	51.27
Bra025435.1-P	Field mustard	plastid	24.63	50.61
Bra028151.1-P	Field mustard	plasma membrane	38.28	45.58
Bra013361.1-P	Field mustard	cytosol, peroxisome, plasma membrane	39.76	45.12
Bra005428.1-P	Field mustard	extracellular, plasma membrane, plastid, vacuole	38.28	45.1
Bra012567.1-P	Field mustard	cytosol, peroxisome, plasma membrane	39.76	44.97
Bra025437.1-P	Field mustard	plasma membrane	36.8	44.93
Bra005430.1-P	Field mustard	cytosol, plasma membrane, plastid, vacuole	37.98	44.6
TraesCS7D01G367800.1	Wheat	golgi, peroxisome, plasma membrane	35.01	42.29
TraesCS7B01G272700.1	Wheat	plasma membrane	35.01	42.29
Solyc06g073590.2.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	42.73	41.74
TraesCS7A01G355000.1	Wheat	peroxisome	34.12	41.22
PGSC0003DMT400015246	Potato	endoplasmic reticulum, peroxisome, plasma membrane	41.84	40.63
KXG20157	Sorghum	golgi, nucleus, plasma membrane	34.72	40.21
Os06t0552700-01	Rice	cytosol, peroxisome, plastid	32.05	39.56
Solyc02g071910.1.1	Tomato	endoplasmic reticulum, extracellular	25.52	37.23
Bra033181.1-P	Field mustard	plasma membrane	33.23	37.21
Bra000710.1-P	Field mustard	plasma membrane	32.94	36.88
Bra035156.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.23	36.72
Bra008442.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.23	36.72
PGSC0003DMT400073240	Potato	cytosol, plasma membrane, vacuole	19.29	35.91
Zm00001d046303_P001	Maize	golgi, peroxisome, plasma membrane	33.23	35.33
Bra020777.1-P	Field mustard	plasma membrane	28.19	34.93

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:Bra033867	EnsemblPlants:Bra033867.1
EnsemblPlants:Bra033867.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	UniProt:M4EYH5
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF155	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI0002548143	:

Description

AT1G31885 (E=4e-143) | transporter

Coordinates

chrA05:-:14632741..14634377

Molecular Weight (calculated)

36084.7 Da

IEP (calculated)

8.311

GRAVY (calculated)

0.332

Length

337 amino acids

Sequence
(BLAST)

001: MSKPLTFSEK SILSMAEISG ITVRTQTTIL NIEDGRSSGD SRLPDSPCSL ICISFVQKLI GEFVGTFSLV FAGCSATVVN DTYGELVTLP GIALAWGLTV
101: MVMTYSIGHV SGAHFNPAVS IALASSRKFP FKQVPGYIAA QLLGSTLAAE ALRLMFHLNN NVCSLKGDVY VGTRPSGSNT ATFIVELIAT FNLLFVISAV
201: ATDKRANRSF AGVAIGATVV LNILFSGPIS GASMNPARSL APAYIWGCYK NLWLYIVSPV IGALIGAWTY NMLRSTNKSY GEIIRPNCNK VSSNDHQEAS
301: QDDSCVLRVV DPNNRKIFIL SSPTDINETC NVTCKLA

Best Arabidopsis Sequence Match ( AT1G31885.1 )
(BLAST)

001: MAEISDITTQ TQTVVLDIEN YQSIDDSRSS DLSAPLVSVS FVQKLIGEFV GTFTMIFAGC SAIVVNETYG KPVTLPGIAL VWGLVVTVMI YSIGHVSGAH
101: FNPAVSIAFA SSKKFPFNQV PGYIAAQLLG STLAAAVLRL VFHLDDDVCS LKGDVYVGTY PSNSNTTSFV MEFIATFNLM FVISAVATDK RATGSFAGIA
201: IGATIVLDIL FSGPISGASM NPARSLGPAL IWGCYKDLWL YIVSPVIGAL SGAWTYGLLR STKKSYSEII RPNCNKVSSR DRQEASQDEI CVLRVVDPAN
301: QNYFICSSPT DINGKCNVTC KLA

Arabidopsis Description

NIP3-1Aquaporin NIP3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6T0]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.