Factsheet for Bra035156.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87340	Canola	cytosol, peroxisome, plasma membrane	99.67	99.67
AT1G80760.1	Thale cress	golgi, peroxisome, plasma membrane	95.74	95.74
Bra008442.1-P	Field mustard	cytosol, peroxisome, plasma membrane	94.75	94.75
Solyc03g117050.2.1	Tomato	plasma membrane	76.39	76.14
PGSC0003DMT400036625	Potato	plasma membrane	76.39	76.14
KRH09661	Soybean	plasma membrane, plastid	75.41	75.66
KRH15764	Soybean	endoplasmic reticulum, extracellular, plastid, vacuole	25.57	75.0
KRH44534	Soybean	plastid	72.46	72.22
Bra000710.1-P	Field mustard	plasma membrane	64.92	65.78
Bra033181.1-P	Field mustard	plasma membrane	63.93	64.78
VIT_09s0070g00080.t01	Wine grape	plastid	71.48	61.58
KRH47366	Soybean	cytosol, plasma membrane, vacuole	43.61	61.29
KRH47369	Soybean	mitochondrion, plastid	36.39	60.33
KRH47396	Soybean	plasma membrane	35.41	59.02
Bra025436.1-P	Field mustard	plastid	30.16	46.7
Bra028151.1-P	Field mustard	plasma membrane	40.0	43.11
Bra025435.1-P	Field mustard	plastid	22.62	42.07
Bra025437.1-P	Field mustard	plasma membrane	38.03	42.03
Bra012567.1-P	Field mustard	cytosol, peroxisome, plasma membrane	40.0	40.94
Bra013361.1-P	Field mustard	cytosol, peroxisome, plasma membrane	39.67	40.74
Bra005428.1-P	Field mustard	extracellular, plasma membrane, plastid, vacuole	35.74	38.11
Bra005430.1-P	Field mustard	cytosol, plasma membrane, plastid, vacuole	35.74	37.98
Bra035520.1-P	Field mustard	plasma membrane	39.67	37.46
Bra020777.1-P	Field mustard	plasma membrane	31.15	34.93
Bra033867.1-P	Field mustard	vacuole	36.72	33.23

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:Bra035156	EnsemblPlants:Bra035156.1
EnsemblPlants:Bra035156.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0007154	GO:GO:0008150	GO:GO:0009605	GO:GO:0009987	GO:GO:0009991
GO:GO:0015168	GO:GO:0015204	GO:GO:0015267	GO:GO:0015793	GO:GO:0016020	GO:GO:0016021
GO:GO:0035445	GO:GO:0046713	GO:GO:0046715	GO:GO:0055085	GO:GO:0071918	GO:GO:0080029
InterPro:IPR023271	UniProt:M4F259	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783
ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF170	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI0002541E24
SEG:seg	:	:	:	:	:

Description

AT1G80760 (E=2e-149) NIP6;1, NIP6, NLM7 | NIP6;1 (NOD26-LIKE INTRINSIC PROTEIN 6;1); boron transporter/ glycerol transmembrane transporter/ urea transmembrane transporter/ water channel/ water transporter

Coordinates

chrA07:+:22395376..22396816

Molecular Weight (calculated)

31818.0 Da

IEP (calculated)

8.476

GRAVY (calculated)

0.423

Length

305 amino acids

Sequence
(BLAST)

001: MDHEEIPSMP STPATTPGTP GAPLFGGFEG KRNGHNGKYT PKSILKSCKC FNVDNEWALE DGRLPPVSCA LPPPNVSLYR KLGAEFVGTL ILIFAGAATA
101: IVNQKTDGAV TLIGCAASAG LAVMIVILST GHISGAHLNP AITIAFAALK HFPWKHVPVY IGAQVMASLC AAFALKAVFE PTMSGGVTVP TVGLSQAFAL
201: EFIISFNLMF VVTAVATDTR AVGELAGIAV GATVMLNILI AGPATSASMN PVRTLGPAIA ANNYRAIWVY LTSPILGALI GAGTYTIVKL PEEDEAPKEK
301: RSFRR

Best Arabidopsis Sequence Match ( AT1G80760.1 )
(BLAST)

001: MDHEEIPSTP STPATTPGTP GAPLFGGFEG KRNGHNGRYT PKSLLKSCKC FSVDNEWALE DGRLPPVTCS LPPPNVSLYR KLGAEFVGTL ILIFAGTATA
101: IVNQKTDGAE TLIGCAASAG LAVMIVILST GHISGAHLNP AVTIAFAALK HFPWKHVPVY IGAQVMASVS AAFALKAVFE PTMSGGVTVP TVGLSQAFAL
201: EFIISFNLMF VVTAVATDTR AVGELAGIAV GATVMLNILI AGPATSASMN PVRTLGPAIA ANNYRAIWVY LTAPILGALI GAGTYTIVKL PEEDEAPKER
301: RSFRR

Arabidopsis Description

NIP6-1Aquaporin NIP6-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAI4]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.