Factsheet for Bra000710.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 2
cytosol 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72002	Canola	plastid	28.24	100.0
CDX90757	Canola	plasma membrane	100.0	100.0
Bra033181.1-P	Field mustard	plasma membrane	95.02	95.02
AT4G10380.1	Thale cress	cytosol	93.36	92.43
GSMUA_AchrUn_...	Banana	extracellular	61.13	82.51
VIT_02s0025g03260.t01	Wine grape	plastid	79.4	80.2
Solyc08g013730.2.1	Tomato	cytosol, plasma membrane, plastid	78.41	80.0
PGSC0003DMT400014852	Potato	cytosol, plasma membrane, plastid	78.41	79.73
KRH35064	Soybean	plastid	71.76	72.24
EER91378	Sorghum	plastid	71.1	71.1
KRG91709	Soybean	plastid	60.13	70.98
Zm00001d032461_P001	Maize	plastid	70.76	70.53
TraesCS1A01G177500.1	Wheat	plastid	69.1	69.33
TraesCS1D01G176000.1	Wheat	plastid	68.77	69.23
TraesCS1B01G202700.1	Wheat	plastid	68.44	69.13
Os10t0513200-01	Rice	plasma membrane	70.1	67.85
Bra008442.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.11	65.25
Bra035156.1-P	Field mustard	cytosol, peroxisome, plasma membrane	65.78	64.92
HORVU3Hr1G014440.3	Barley	golgi, mitochondrion, plasma membrane	53.82	62.79
GSMUA_Achr1P04130_001	Banana	plasma membrane	73.75	61.84
HORVU1Hr1G047100.3	Barley	plastid	60.13	49.32
Bra025436.1-P	Field mustard	plastid	31.23	47.72
Bra028151.1-P	Field mustard	plasma membrane	41.86	44.52
Bra025435.1-P	Field mustard	plastid	23.59	43.29
Bra025437.1-P	Field mustard	plasma membrane	38.54	42.03
Bra012567.1-P	Field mustard	cytosol, peroxisome, plasma membrane	37.54	37.92
Bra013361.1-P	Field mustard	cytosol, peroxisome, plasma membrane	37.21	37.71
Bra035520.1-P	Field mustard	plasma membrane	40.2	37.46
Bra005430.1-P	Field mustard	cytosol, plasma membrane, plastid, vacuole	35.22	36.93
Bra005428.1-P	Field mustard	extracellular, plasma membrane, plastid, vacuole	34.88	36.71
Bra020777.1-P	Field mustard	plasma membrane	30.23	33.46
Bra033867.1-P	Field mustard	vacuole	36.88	32.94

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:Bra000710	EnsemblPlants:Bra000710.1
EnsemblPlants:Bra000710.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	UniProt:M4C932
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF159	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI0002540358	SEG:seg	:

Description

AT4G10380 (E=2e-134) NIP5;1, NLM6, NLM8 | NIP5;1; arsenite transmembrane transporter/ boron transporter/ water channel

Coordinates

chrA03:-:12582344..12589091

Molecular Weight (calculated)

31214.2 Da

IEP (calculated)

8.746

GRAVY (calculated)

0.532

Length

301 amino acids

Sequence
(BLAST)

001: MSPPEAEMGA VAVTAPPTPG TPGGPLITGM RVDSMSFDHR KPIPPCKCLP VMGNRWGQHD TCFADFPSPG VSLTRKLGAE FVGTFILIFT ATAGPIVNQK
101: YDGAETLIGN AACAGLAVMI IILSTGHISG AHLNPSLTIA FAALRHFPWA HVPAYIAAQV SASVCASFAL KAVFHPFMSG GVTVPSVSVG QAFALEFIIS
201: FILLFVVTAV ATDTRAVGEL AGIAVGATVM LNILVAGPST GASMNPVRTL GPALASGNYR LLWVYLVAPT LGAISGAAVY TGVKLNDNVT DPPRQVRSFR
301: R

Best Arabidopsis Sequence Match ( AT4G10380.1 )
(BLAST)

001: MAPPEAEVGA VMVMAPPTPG TPGTPGGPLI TGMRVDSMSF DHRKPTPRCK CLPVMGSTWG QHDTCFTDFP SPDVSLTRKL GAEFVGTFIL IFTATAGPIV
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR

Arabidopsis Description

NIP5-1At4g10380 [Source:UniProtKB/TrEMBL;Acc:A3KPG0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.