Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- golgi 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G176000.1 | Wheat | plastid | 97.99 | 97.66 |
| TraesCS1A01G177500.1 | Wheat | plastid | 97.65 | 97.0 |
| EER91378 | Sorghum | plastid | 87.92 | 87.04 |
| Os10t0513200-01 | Rice | plasma membrane | 89.6 | 85.85 |
| Zm00001d032461_P001 | Maize | plastid | 85.57 | 84.44 |
| HORVU3Hr1G014440.3 | Barley | golgi, mitochondrion, plasma membrane | 72.48 | 83.72 |
| GSMUA_AchrUn_... | Banana | extracellular | 61.07 | 81.61 |
| CDY72002 | Canola | plastid | 21.48 | 75.29 |
| Solyc08g013730.2.1 | Tomato | cytosol, plasma membrane, plastid | 74.5 | 75.25 |
| VIT_02s0025g03260.t01 | Wine grape | plastid | 75.17 | 75.17 |
| PGSC0003DMT400014852 | Potato | cytosol, plasma membrane, plastid | 74.16 | 74.66 |
| KRH35064 | Soybean | plastid | 71.48 | 71.24 |
| AT4G10380.1 | Thale cress | cytosol | 71.48 | 70.07 |
| CDX94261 | Canola | plasma membrane | 70.47 | 69.77 |
| CDY51581 | Canola | plastid | 16.78 | 69.44 |
| CDY25253 | Canola | plasma membrane | 70.13 | 69.44 |
| Bra033181.1-P | Field mustard | plasma membrane | 70.13 | 69.44 |
| KRG91709 | Soybean | plastid | 58.72 | 68.63 |
| CDX90757 | Canola | plasma membrane | 69.13 | 68.44 |
| CDY05100 | Canola | plasma membrane | 69.13 | 68.44 |
| Bra000710.1-P | Field mustard | plasma membrane | 69.13 | 68.44 |
| CDY16269 | Canola | plastid | 16.44 | 68.06 |
| CDX67591 | Canola | plasma membrane | 68.12 | 67.44 |
| GSMUA_Achr1P04130_001 | Banana | plasma membrane | 72.82 | 60.45 |
| TraesCS3B01G368100.1 | Wheat | plasma membrane | 38.26 | 46.15 |
| TraesCS5B01G342100.1 | Wheat | cytosol, golgi, plasma membrane | 40.94 | 42.36 |
| TraesCS7B01G476700.1 | Wheat | cytosol, golgi, plasma membrane | 40.94 | 41.92 |
| TraesCS3B01G156700.1 | Wheat | plasma membrane | 37.25 | 41.42 |
| TraesCS7B01G122600.2 | Wheat | plasma membrane | 38.26 | 41.01 |
| TraesCS6B01G105300.1 | Wheat | golgi, plasma membrane, vacuole | 37.58 | 39.72 |
| TraesCS7B01G092900.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 39.26 | 39.0 |
| TraesCS6B01G335900.1 | Wheat | golgi, peroxisome, plasma membrane | 38.59 | 38.98 |
| TraesCS7B01G204200.1 | Wheat | plasma membrane, plastid, vacuole | 35.91 | 38.63 |
| TraesCS7B01G272700.1 | Wheat | plasma membrane | 34.23 | 36.56 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.1 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0008150 |
| GO:GO:0009605 | GO:GO:0009987 | GO:GO:0009991 | GO:GO:0010036 | GO:GO:0015105 | GO:GO:0015250 |
| GO:GO:0015267 | GO:GO:0015700 | GO:GO:0016020 | GO:GO:0016328 | GO:GO:0046685 | GO:GO:0046713 |
| GO:GO:0046715 | GO:GO:0055085 | GO:GO:0080029 | InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS |
| PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF102 | SUPFAM:SSF81338 |
| TMHMM:TMhelix | EnsemblPlantsGene:TraesCS1B01G202700 | EnsemblPlants:TraesCS1B01G202700.1 | TIGR:cd00333 | SEG:seg | : |
Description
No Description!
Coordinates
chr1B:-:364290170..364293860
Molecular Weight (calculated)
30958.7 Da
IEP (calculated)
9.258
GRAVY (calculated)
0.509
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MESAAGAETP NLSAPATPGT PAPLFAGARV DSLSYERKSM PRCRCLPVDA WMSSNACVVE IPAPDVSLPR KLGAEFVGTF ILIFFATAAP IVNQKYGGVI
101: SPFGNAACAG LAVTTIILST GHISGAHLNP SLTIAFAAFR HFPWLQVPAY VTAQVLGSIS AGFALKGVFH PFLSGGVTVP DVTISTAQAL FTEFIITFNL
201: LFVVTAVATD TRAVGELAGI AVGAAVTLNI LVAGPTTGGS MNPVRTLGPA VAAGNYRQLW IYLVAPTLGA VCGAGVYKLV KLRDVNGETP RPQRSFRR
101: SPFGNAACAG LAVTTIILST GHISGAHLNP SLTIAFAAFR HFPWLQVPAY VTAQVLGSIS AGFALKGVFH PFLSGGVTVP DVTISTAQAL FTEFIITFNL
201: LFVVTAVATD TRAVGELAGI AVGAAVTLNI LVAGPTTGGS MNPVRTLGPA VAAGNYRQLW IYLVAPTLGA VCGAGVYKLV KLRDVNGETP RPQRSFRR
001: MAPPEAEVGA VMVMAPPTPG TPGTPGGPLI TGMRVDSMSF DHRKPTPRCK CLPVMGSTWG QHDTCFTDFP SPDVSLTRKL GAEFVGTFIL IFTATAGPIV
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR
Arabidopsis Description
NIP5-1At4g10380 [Source:UniProtKB/TrEMBL;Acc:A3KPG0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.