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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid, vacuole

Predictor Summary:
  • plasma membrane 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • golgi 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane, plastid, vacuole
Any Predictor:plasma membrane, plastid, vacuole
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G303800.1 Wheat plasma membrane 93.5 95.57
TraesCS7D01G299300.1 Wheat plasma membrane 80.14 94.47
HORVU7Hr1G072160.1 Barley extracellular, golgi 25.63 85.54
TraesCS6B01G105300.1 Wheat golgi, plasma membrane, vacuole 68.23 67.02
EES14542 Sorghum golgi, peroxisome, vacuole 63.9 61.25
Zm00001d049578_P001 Maize golgi, plasma membrane, vacuole 63.9 59.8
TraesCS3B01G368100.1 Wheat plasma membrane 50.9 57.09
TraesCS1B01G202700.1 Wheat plastid 38.63 35.91
TraesCS5B01G342100.1 Wheat cytosol, golgi, plasma membrane 34.66 33.33
TraesCS7B01G272700.1 Wheat plasma membrane 32.85 32.62
TraesCS7B01G122600.2 Wheat plasma membrane 32.49 32.37
TraesCS7B01G476700.1 Wheat cytosol, golgi, plasma membrane 32.85 31.27
TraesCS6B01G335900.1 Wheat golgi, peroxisome, plasma membrane 32.85 30.85
TraesCS3B01G156700.1 Wheat plasma membrane 28.52 29.48
TraesCS7B01G092900.1 Wheat endoplasmic reticulum, golgi, peroxisome 31.41 29.0
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.1InterPro:Aquaporin-likeInterPro:Aquaporin_transptrGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0055085
InterPro:IPR023271InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221
PANTHER:PTHR19139PANTHER:PTHR19139:SF159SUPFAM:SSF81338TMHMM:TMhelixEnsemblPlantsGene:TraesCS7B01G204200EnsemblPlants:TraesCS7B01G204200.1
SEG:seg:::::
Description
No Description!
Coordinates
chr7B:+:374558629..374559708
Molecular Weight (calculated)
28424.2 Da
IEP (calculated)
9.780
GRAVY (calculated)
0.701
Length
277 amino acids
Sequence
(BLAST)
001: MELSRSVTMD VSLSIPAARG VGGDGTDRRA PRNSPSFKIV PLHDEMAKPS PGGRGHERAA VLLAKKVLAE LLGTFLLLFI LLSALILNAT HDGALGLLGV
101: AATAGLAVTL LVASLVHISG AHLNPAISVS MAVYGYLPRA HLAPYMAAQF LGAIAASFVA KAVYHPANPG AIVATVPTLG TAETFLIEFL TTFVLLFVIV
201: AHATDPKAVK ELIAVAAGAA IMMNALISAE STGASMNPAR TLGTAIATGT YTKIWVYMVA PPLGAIAGTG AYIALKH
Best Arabidopsis Sequence Match ( AT1G31885.1 )
(BLAST)
001: MAEISDITTQ TQTVVLDIEN YQSIDDSRSS DLSAPLVSVS FVQKLIGEFV GTFTMIFAGC SAIVVNETYG KPVTLPGIAL VWGLVVTVMI YSIGHVSGAH
101: FNPAVSIAFA SSKKFPFNQV PGYIAAQLLG STLAAAVLRL VFHLDDDVCS LKGDVYVGTY PSNSNTTSFV MEFIATFNLM FVISAVATDK RATGSFAGIA
201: IGATIVLDIL FSGPISGASM NPARSLGPAL IWGCYKDLWL YIVSPVIGAL SGAWTYGLLR STKKSYSEII RPNCNKVSSR DRQEASQDEI CVLRVVDPAN
301: QNYFICSSPT DINGKCNVTC KLA
Arabidopsis Description
NIP3-1Aquaporin NIP3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6T0]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.