Factsheet for TraesCS3B01G368100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G330000.1	Wheat	plasma membrane	91.9	92.28
HORVU3Hr1G079560.5	Barley	golgi, plasma membrane	91.5	91.5
TraesCS5A01G525500.1	Wheat	plasma membrane	84.62	80.69
Os08t0152100-00	Rice	endoplasmic reticulum, plasma membrane, vacuole	66.4	77.36
OQU79872	Sorghum	cytosol, peroxisome, vacuole	72.06	59.93
Os08t0152000-01	Rice	cytosol, plasma membrane, plastid	70.85	57.38
TraesCS7B01G204200.1	Wheat	plasma membrane, plastid, vacuole	57.09	50.9
Os12t0204100-01	Rice	cytosol, peroxisome, plastid	59.51	50.52
TraesCS6B01G105300.1	Wheat	golgi, plasma membrane, vacuole	56.68	49.65
TraesCS1B01G202700.1	Wheat	plastid	46.15	38.26
TraesCS5B01G342100.1	Wheat	cytosol, golgi, plasma membrane	43.32	37.15
TraesCS3B01G156700.1	Wheat	plasma membrane	40.08	36.94
TraesCS7B01G476700.1	Wheat	cytosol, golgi, plasma membrane	41.7	35.4
TraesCS7B01G122600.2	Wheat	plasma membrane	38.06	33.81
TraesCS7B01G272700.1	Wheat	plasma membrane	35.22	31.18
TraesCS6B01G335900.1	Wheat	golgi, peroxisome, plasma membrane	36.84	30.85
TraesCS7B01G092900.1	Wheat	endoplasmic reticulum, golgi, peroxisome	35.63	29.33

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0055085
InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221
PANTHER:PTHR19139	PANTHER:PTHR19139:SF159	SUPFAM:SSF81338	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3B01G368100	EnsemblPlants:TraesCS3B01G368100.1

Description

No Description!

Coordinates

chr3B:+:580220345..580221355

Molecular Weight (calculated)

25563.6 Da

IEP (calculated)

7.030

GRAVY (calculated)

0.773

Length

247 amino acids

Sequence
(BLAST)

001: MEPITHVDDG NGDQAASHAA RQRRPKFPNM AAVPLLKKVT AEFLGTFILM FTQVSTIIMD EQHDGVEGLM GIAVSVGLAV TVLVFSTIHI SGCHLNPAVS
101: IAMAVFGHLP PAHLVPYVAA QVLGSTAASF VGNAIYHPVN PGIATVPSVG IVEAFAVEFI ITLVLLFVIT AVATDPHAVK ELIAVAVGAT VVMNILVAGP
201: STGASMNPAR TIGPAIVTGR YNKIWVYLLA TPLGAIAGAG SYVAIKL

Best Arabidopsis Sequence Match ( AT4G10380.1 )
(BLAST)

001: MAPPEAEVGA VMVMAPPTPG TPGTPGGPLI TGMRVDSMSF DHRKPTPRCK CLPVMGSTWG QHDTCFTDFP SPDVSLTRKL GAEFVGTFIL IFTATAGPIV
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR

Arabidopsis Description

NIP5-1At4g10380 [Source:UniProtKB/TrEMBL;Acc:A3KPG0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.