Factsheet for TraesCS3D01G330000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G368100.1	Wheat	plasma membrane	92.28	91.9
HORVU3Hr1G079560.5	Barley	golgi, plasma membrane	89.84	89.47
TraesCS4D01G349700.1	Wheat	plasma membrane	83.33	79.15
Os08t0152100-00	Rice	endoplasmic reticulum, plasma membrane, vacuole	62.6	72.64
TraesCS7D01G299300.1	Wheat	plasma membrane	56.1	58.72
OQU79872	Sorghum	cytosol, peroxisome, vacuole	68.29	56.57
Os08t0152000-01	Rice	cytosol, plasma membrane, plastid	66.67	53.77
Os12t0204100-01	Rice	cytosol, peroxisome, plastid	58.94	49.83
TraesCS6D01G072000.1	Wheat	plasma membrane	57.32	49.47
TraesCS1D01G176000.1	Wheat	plastid	47.15	38.8
TraesCS3D01G139400.1	Wheat	plasma membrane	38.21	37.9
TraesCS5D01G347600.1	Wheat	cytosol, golgi, plasma membrane	42.28	36.11
TraesCS7D01G539500.1	Wheat	cytosol, golgi, plasma membrane	41.87	35.4
TraesCS7D01G217400.1	Wheat	plasma membrane	37.4	33.09
TraesCS7D01G367800.1	Wheat	golgi, peroxisome, plasma membrane	34.55	30.47
TraesCS6D01G286400.1	Wheat	golgi, peroxisome, plasma membrane	34.96	29.15
TraesCS7D01G188800.2	Wheat	plasma membrane	34.55	28.33
TraesCS3D01G002300.1	Wheat	plasma membrane	28.46	24.31

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0055085
InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221
PANTHER:PTHR19139	PANTHER:PTHR19139:SF159	SUPFAM:SSF81338	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3D01G330000	EnsemblPlants:TraesCS3D01G330000.1

Description

No Description!

Coordinates

chr3D:+:442775207..442776212

Molecular Weight (calculated)

25414.4 Da

IEP (calculated)

7.346

GRAVY (calculated)

0.715

Length

246 amino acids

Sequence
(BLAST)

001: MIVPMEPINH VDDGNGDQPA SHAARQRRPK FPNMVAVPLL KKATAEFLGT FILMFTQVSA IIIDDQHDGV EGLMGIAVSV GLAVTVLVFS TIHVSGCHLN
101: PAVSIAMAAF GHLPPAHLAP YVTAQVLGST AASFVGNAIY HPVNPGIATV PSVGAVEFII TFVLLFVITA VATDPHAVKE LIAVAVGATV VMNILVAGPS
201: TGASMNPGRT IGPAIVTGRY NKIWVYLVAQ PLGAIAGAGS YVAIKL

Best Arabidopsis Sequence Match ( AT1G31885.1 )
(BLAST)

001: MAEISDITTQ TQTVVLDIEN YQSIDDSRSS DLSAPLVSVS FVQKLIGEFV GTFTMIFAGC SAIVVNETYG KPVTLPGIAL VWGLVVTVMI YSIGHVSGAH
101: FNPAVSIAFA SSKKFPFNQV PGYIAAQLLG STLAAAVLRL VFHLDDDVCS LKGDVYVGTY PSNSNTTSFV MEFIATFNLM FVISAVATDK RATGSFAGIA
201: IGATIVLDIL FSGPISGASM NPARSLGPAL IWGCYKDLWL YIVSPVIGAL SGAWTYGLLR STKKSYSEII RPNCNKVSSR DRQEASQDEI CVLRVVDPAN
301: QNYFICSSPT DINGKCNVTC KLA

Arabidopsis Description

NIP3-1Aquaporin NIP3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6T0]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.