CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 1
mitochondrion 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0152100-00	Rice	endoplasmic reticulum, plasma membrane, vacuole	58.92	82.55
Os08t0152000-01	Rice	cytosol, plasma membrane, plastid	78.11	76.07
TraesCS3B01G368100.1	Wheat	plasma membrane	59.93	72.06
HORVU3Hr1G079560.5	Barley	golgi, plasma membrane	58.25	70.04
TraesCS3D01G330000.1	Wheat	plasma membrane	56.57	68.29
TraesCS5A01G525500.1	Wheat	plasma membrane	57.91	66.41
TraesCS4D01G349700.1	Wheat	plasma membrane	57.91	66.41
Os12t0204100-01	Rice	cytosol, peroxisome, plastid	55.56	56.7
EES14542	Sorghum	golgi, peroxisome, vacuole	52.86	54.33
KXG24412	Sorghum	vacuole	44.44	42.86
EER91378	Sorghum	plastid	41.75	41.2
OQU77604	Sorghum	plasma membrane	33.0	34.63
KXG31601	Sorghum	golgi, plasma membrane, plastid	32.66	34.4
EES06549	Sorghum	cytoskeleton, cytosol, peroxisome	33.0	34.15
EES07262	Sorghum	cytosol, peroxisome, plasma membrane	31.99	31.99
EER89472	Sorghum	cytosol, plasma membrane, plastid	29.29	29.49
KXG20157	Sorghum	golgi, nucleus, plasma membrane	27.95	28.52
EES00431	Sorghum	plasma membrane	24.24	24.91

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	EntrezGene:8076568	UniProt:A0A1Z5R7W6	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS
EnsemblPlants:OQU79872	ProteinID:OQU79872	ProteinID:OQU79872.1	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221
PANTHER:PTHR19139	PANTHER:PTHR19139:SF159	EnsemblPlantsGene:SORBI_3007G039600	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI0001A873A5
RefSeq:XP_002443852.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:3826797..3828613

Molecular Weight (calculated)

31169.5 Da

IEP (calculated)

7.851

GRAVY (calculated)

0.606

Length

297 amino acids

Sequence
(BLAST)

001: MEEQKRSMGD VTAVAVPPMQ TSESNKISII ISPRAATSKI MPFELIHAGS VSSRPHADVA ESSGAHATHH HRWNQGLPKI NAVPLIKKVG AEFLGTFILI
101: FTVSSTIIMN EQHDGVESLL GIATSAGLAV TVLVLSLIHI SGCHLNPAVS IAMAVFGHLP LAHILPYVAA QILGSIAASF TVKGIYHPVN PGIATIPKVG
201: TTEAFFLEFI TTFVLLFIIT ALATDPHAVK ELIAVAVGAT IMMNALVAGP STEASMNPAR TLGPAIATCR YTQIWIYMVA TPLGAIAGTG AYVAIKL

Best Arabidopsis Sequence Match ( AT4G10380.1 )
(BLAST)

001: MAPPEAEVGA VMVMAPPTPG TPGTPGGPLI TGMRVDSMSF DHRKPTPRCK CLPVMGSTWG QHDTCFTDFP SPDVSLTRKL GAEFVGTFIL IFTATAGPIV
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR

Arabidopsis Description

NIP5-1At4g10380 [Source:UniProtKB/TrEMBL;Acc:A3KPG0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.