CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040108_P001	Maize	plasma membrane	82.35	79.6
Os01t0112400-01	Rice	plasma membrane	63.67	64.34
TraesCS3D01G002300.1	Wheat	plasma membrane	59.17	59.38
TraesCS3A01G008700.1	Wheat	plasma membrane	58.82	59.03
TraesCSU01G041600.1	Wheat	plasma membrane	58.48	58.68
HORVU3Hr1G001320.1	Barley	plasma membrane, vacuole	42.56	44.4
KXG31601	Sorghum	golgi, plasma membrane, plastid	31.14	31.91
OQU77604	Sorghum	plasma membrane	29.07	29.68
HORVU3Hr1G001420.2	Barley	nucleus	21.8	28.9
EES06549	Sorghum	cytoskeleton, cytosol, peroxisome	27.68	27.87
Solyc01g079890.2.1	Tomato	plasma membrane	26.99	27.46
PGSC0003DMT400084932	Potato	plasma membrane	26.64	26.83
KXG20157	Sorghum	golgi, nucleus, plasma membrane	26.3	26.12
KRH32130	Soybean	plasma membrane	24.91	26.09
EER91378	Sorghum	plastid	26.99	25.91
EER89472	Sorghum	cytosol, plasma membrane, plastid	25.95	25.42
EES07262	Sorghum	cytosol, peroxisome, plasma membrane	25.95	25.25
AT3G06100.1	Thale cress	plasma membrane	23.88	25.09
CDY27709	Canola	plasma membrane	23.18	24.63
CDY05231	Canola	plasma membrane	23.18	24.63
Bra020777.1-P	Field mustard	plasma membrane	23.18	24.63
KRH71310	Soybean	plasma membrane	24.91	24.32
OQU79872	Sorghum	cytosol, peroxisome, vacuole	24.91	24.24
EES14542	Sorghum	golgi, peroxisome, vacuole	24.22	24.22
VIT_05s0020g02740.t01	Wine grape	plasma membrane	23.18	22.87
KXG24412	Sorghum	vacuole	22.49	21.1

Protein Annotations

Gene3D:1.20.1080.10	MapMan:35.1	EntrezGene:8079070	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	UniProt:C5XEU9
EnsemblPlants:EES00431	ProteinID:EES00431	ProteinID:EES00431.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150
GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085
InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221
PANTHER:PTHR19139	PANTHER:PTHR19139:SF182	EnsemblPlantsGene:SORBI_3003G098100	SUPFAM:SSF81338	unigene:Sbi.21033	TMHMM:TMhelix
UniParc:UPI0001A848DB	RefSeq:XP_002455311.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:8668414..8671066

Molecular Weight (calculated)

30150.3 Da

IEP (calculated)

7.434

GRAVY (calculated)

0.675

Length

289 amino acids

Sequence
(BLAST)

001: MAEKDFADGV GAVDEQDLER SCRDQDDPAA AADGVSRGLA IGHFVRELMV ECVASFLLVF WSAVAALMQE MHGTLTFPMV CLVVALTVGF VLCWLGPAHF
101: NPAVTLTFTV FGYLPWPKLP LYVVAQLAGS LLACVAANGV MKPREEHFYG TAPMMAGGHT RLPFLLELVA SAVLMIVIAI AARGSNQTAG GLAIGAAVGT
201: LGLVIGPVSG GSMNPIRTLG PAIVLGRYTS VWIYLVAPVA GMLIGALCNR VVRGSDAILA FLCGTKPTRA VAPRATPRAV GSLASSPHY

Best Arabidopsis Sequence Match ( AT5G37820.1 )
(BLAST)

001: MTSHGEEIED EQISRIEKGN CKDSQGGMET AICSSPSIVC LTQKLIAEMI GTYFIIFSGC GVVVVNVLYG GTITFPGICV TWGLIVMVMI YSTGHISGAH
101: FNPAVTVTFA VFRRFPWYQV PLYIGAQLTG SLLASLTLRL MFNVTPKAFF GTTPTDSSGQ ALVAEIIISF LLMFVISGVA TDSRATGELA GIAVGMTIIL
201: NVFVAGPISG ASMNPARSLG PAIVMGRYKG IWVYIVGPFV GIFAGGFVYN FMRFTDKPLR ELTKSASFLR SVAQKDNASK SDG

Arabidopsis Description

NIP4;2NOD26-like intrinsic protein 4;2 [Source:TAIR;Acc:AT5G37820]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.