Factsheet for Solyc01g079890.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
plasma membrane 4
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400084932	Potato	plasma membrane	98.24	97.21
KRH32130	Soybean	plasma membrane	51.76	53.26
VIT_05s0020g02740.t01	Wine grape	plasma membrane	54.23	52.56
KRH71310	Soybean	plasma membrane	53.17	51.01
AT3G06100.1	Thale cress	plasma membrane	47.89	49.45
Bra020777.1-P	Field mustard	plasma membrane	45.07	47.06
CDY27709	Canola	plasma membrane	45.07	47.06
CDY05231	Canola	plasma membrane	44.72	46.69
Solyc05g008080.1.1	Tomato	plasma membrane	33.8	35.29
Solyc03g005980.2.1	Tomato	plasma membrane	33.45	34.3
Solyc02g071920.2.1	Tomato	plasma membrane	33.1	32.41
Solyc08g013730.2.1	Tomato	cytosol, plasma membrane, plastid	33.1	31.86
Solyc02g091420.2.1	Tomato	plasma membrane	29.93	31.84
Solyc02g071910.1.1	Tomato	endoplasmic reticulum, extracellular	25.35	31.17
Solyc12g057050.1.1	Tomato	extracellular, peroxisome, vacuole	28.52	31.15
Solyc02g063310.2.1	Tomato	cytosol, extracellular, vacuole	14.79	30.66
Solyc03g013340.2.1	Tomato	cytosol	29.93	30.04
Os01t0112400-01	Rice	plasma membrane	28.87	28.67
Solyc03g117050.2.1	Tomato	plasma membrane	29.93	27.78
EES00431	Sorghum	plasma membrane	27.46	26.99
TraesCS3D01G002300.1	Wheat	plasma membrane	26.76	26.39
TraesCSU01G041600.1	Wheat	plasma membrane	26.76	26.39
Solyc06g073590.2.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	32.04	26.38
Zm00001d040108_P001	Maize	plasma membrane	27.11	25.75
TraesCS3A01G008700.1	Wheat	plasma membrane	26.06	25.69
HORVU3Hr1G001320.1	Barley	plasma membrane, vacuole	19.01	19.49
HORVU3Hr1G001420.2	Barley	nucleus	11.97	15.6

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833
GO:GO:0008150	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220
GO:GO:0035445	GO:GO:0046715	GO:GO:0055085	InterPro:IPR023271	UniProt:K4AXN4	InterPro:MIP
InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF171
SUPFAM:SSF81338	EnsemblPlantsGene:Solyc01g079890.2	EnsemblPlants:Solyc01g079890.2.1	TMHMM:TMhelix	UniParc:UPI0002761F44	SEG:seg

Description

Probable aquaporin NIP7-1 [Source:Projected from Arabidopsis thaliana (AT3G06100) UniProtKB/Swiss-Prot;Acc:Q8LAI1]

Coordinates

chr1:-:79070877..79072892

Molecular Weight (calculated)

30330.3 Da

IEP (calculated)

6.659

GRAVY (calculated)

0.641

Length

284 amino acids

Sequence
(BLAST)

001: MKLPSYENGL SVEFQVDASA SEQSTYDQET TSSNVEMLER RNVCNSILGI DPIFLRMVLA EALGTFLLMF CICGMMASME IMGVQVGLME YATTAALTVV
101: VVVFSIGPIS GAHINPAVTL AFAAVGHFPW SKVPLYVVAQ VGGSILATYT GKLVYGLKAE FVTTKPLHSC TSAFFVELLA TFIVLFLSAS LTNYDPQSTG
201: PLSGFLVGVA IGLAVLISGP VSGGSMNPAR SLGPAIVAWK FNNLWIYVIA PIIGAVAGVV FYRFLRLQGW SCKPNSTPTT HQHI

Best Arabidopsis Sequence Match ( AT3G06100.1 )
(BLAST)

001: MNGEARSRVV DQEAGSTPST LRDEDHPSRQ RLFGCLPYDI DLNPLRIVMA ELVGTFILMF SVCGVISSTQ LSGGHVGLLE YAVTAGLSVV VVVYSIGHIS
101: GAHLNPSITI AFAVFGGFPW SQVPLYITAQ TLGATAATLV GVSVYGVNAD IMATKPALSC VSAFFVELIA TSIVVFLASA LHCGPHQNLG NLTGFVIGTV
201: ISLGVLITGP ISGGSMNPAR SLGPAVVAWD FEDLWIYMTA PVIGAIIGVL TYRSISLKTR PCPSPVSPSV SSLLR

Arabidopsis Description

NIP7-1NLM8 [Source:UniProtKB/TrEMBL;Acc:A0A178V7E3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.