Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES00431 | Sorghum | plasma membrane | 79.6 | 82.35 |
| Os01t0112400-01 | Rice | plasma membrane | 61.87 | 64.69 |
| TraesCS3D01G002300.1 | Wheat | plasma membrane | 57.53 | 59.72 |
| TraesCS3A01G008700.1 | Wheat | plasma membrane | 57.53 | 59.72 |
| TraesCSU01G041600.1 | Wheat | plasma membrane | 57.19 | 59.38 |
| HORVU3Hr1G001320.1 | Barley | plasma membrane, vacuole | 42.47 | 45.85 |
| Zm00001d037733_P001 | Maize | plasma membrane | 29.43 | 30.99 |
| Zm00001d016237_P001 | Maize | cytosol, peroxisome, plasma membrane | 28.76 | 30.5 |
| HORVU3Hr1G001420.2 | Barley | nucleus | 21.4 | 29.36 |
| Solyc01g079890.2.1 | Tomato | plasma membrane | 25.75 | 27.11 |
| PGSC0003DMT400084932 | Potato | plasma membrane | 25.75 | 26.83 |
| Zm00001d024634_P001 | Maize | cytosol, peroxisome, vacuole | 24.75 | 26.52 |
| KRH32130 | Soybean | plasma membrane | 23.75 | 25.72 |
| Zm00001d032461_P001 | Maize | plastid | 25.75 | 25.5 |
| AT3G06100.1 | Thale cress | plasma membrane | 23.41 | 25.45 |
| Zm00001d037228_P001 | Maize | cytosol, plasma membrane, plastid | 24.75 | 25.17 |
| Zm00001d018037_P001 | Maize | cytosol, peroxisome, plasma membrane | 24.41 | 24.75 |
| Zm00001d049578_P001 | Maize | golgi, plasma membrane, vacuole | 24.41 | 24.66 |
| Bra020777.1-P | Field mustard | plasma membrane | 22.41 | 24.63 |
| CDY27709 | Canola | plasma membrane | 22.41 | 24.63 |
| CDY05231 | Canola | plasma membrane | 22.41 | 24.63 |
| Zm00001d044826_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 24.41 | 24.25 |
| KRH71310 | Soybean | plasma membrane | 23.75 | 23.99 |
| VIT_05s0020g02740.t01 | Wine grape | plasma membrane | 23.08 | 23.55 |
| Zm00001d052261_P001 | Maize | cytosol, plasma membrane, plastid | 15.72 | 22.27 |
| Zm00001d046303_P001 | Maize | golgi, peroxisome, plasma membrane | 22.74 | 21.45 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:35.1 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | UniProt:B8A166 | EMBL:BT055308 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS |
| ProteinID:ONM30549.1 | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF182 |
| SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI0001917550 | EnsemblPlantsGene:Zm00001d040108 | EnsemblPlants:Zm00001d040108_P001 | EnsemblPlants:Zm00001d040108_T001 |
| SEG:seg | : | : | : | : | : |
Description
Probable aquaporin NIP4-2
Coordinates
chr3:+:27850931..27852740
Molecular Weight (calculated)
31053.4 Da
IEP (calculated)
8.059
GRAVY (calculated)
0.683
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAMMMDSTA EKDLAGDGAA VSGHGQDLER SCHDQEPAAA DGASSRGLAI GRFVRELMVE GVASFLLVFW SAVAALMQEM HGTLTFPMVC LVVALTVVFV
101: LCWLGPAHFN PAVTVTFTVF GYLSWTKLPF YVAAQLAGSL LACLSANGVM EPRAEHFYGT VPMAGGDTRL PFLLELVASA LLMVVIATAA RGSNQTAGGL
201: AIGAAVGALG LVIGPVSGGS MNPIRTLGPA IVLGRYTSVW IYLVAPVAGM LIGALCNRLV RRSDAIIAFL CGAKPRVVAP GQNRAARRWS TCVSALLAG
101: LCWLGPAHFN PAVTVTFTVF GYLSWTKLPF YVAAQLAGSL LACLSANGVM EPRAEHFYGT VPMAGGDTRL PFLLELVASA LLMVVIATAA RGSNQTAGGL
201: AIGAAVGALG LVIGPVSGGS MNPIRTLGPA IVLGRYTSVW IYLVAPVAGM LIGALCNRLV RRSDAIIAFL CGAKPRVVAP GQNRAARRWS TCVSALLAG
001: MTSHGEEIED EQISRIEKGN CKDSQGGMET AICSSPSIVC LTQKLIAEMI GTYFIIFSGC GVVVVNVLYG GTITFPGICV TWGLIVMVMI YSTGHISGAH
101: FNPAVTVTFA VFRRFPWYQV PLYIGAQLTG SLLASLTLRL MFNVTPKAFF GTTPTDSSGQ ALVAEIIISF LLMFVISGVA TDSRATGELA GIAVGMTIIL
201: NVFVAGPISG ASMNPARSLG PAIVMGRYKG IWVYIVGPFV GIFAGGFVYN FMRFTDKPLR ELTKSASFLR SVAQKDNASK SDG
101: FNPAVTVTFA VFRRFPWYQV PLYIGAQLTG SLLASLTLRL MFNVTPKAFF GTTPTDSSGQ ALVAEIIISF LLMFVISGVA TDSRATGELA GIAVGMTIIL
201: NVFVAGPISG ASMNPARSLG PAIVMGRYKG IWVYIVGPFV GIFAGGFVYN FMRFTDKPLR ELTKSASFLR SVAQKDNASK SDG
Arabidopsis Description
NIP4;2NOD26-like intrinsic protein 4;2 [Source:TAIR;Acc:AT5G37820]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.