Factsheet for Zm00001d037733_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU77604	Sorghum	plasma membrane	92.61	92.93
TraesCS5B01G342100.1	Wheat	cytosol, golgi, plasma membrane	80.63	79.51
TraesCS5D01G347600.1	Wheat	cytosol, golgi, plasma membrane	80.63	79.51
TraesCS7B01G476700.1	Wheat	cytosol, golgi, plasma membrane	80.99	79.04
TraesCS5A01G342900.1	Wheat	golgi, peroxisome, plasma membrane	80.28	78.89
HORVU7Hr1G121250.3	Barley	cytosol, golgi, plasma membrane	80.99	78.77
TraesCS7A01G553000.1	Wheat	cytosol, golgi, plasma membrane	80.28	78.62
TraesCS7D01G539500.1	Wheat	cytosol, golgi, plasma membrane	79.93	78.01
Os05t0205050-00	Rice	cytosol, peroxisome, plastid	53.52	70.37
HORVU5Hr1G085710.3	Barley	cytosol, peroxisome, plasma membrane	80.99	69.07
Os05t0205000-01	Rice	cytosol	20.77	67.05
Zm00001d016237_P001	Maize	cytosol, peroxisome, plasma membrane	64.79	65.25
Zm00001d046303_P001	Maize	golgi, peroxisome, plasma membrane	49.65	44.48
GSMUA_Achr10P...	Banana	cytosol, extracellular, plastid	36.62	41.27
Zm00001d018037_P001	Maize	cytosol, peroxisome, plasma membrane	40.14	38.64
Zm00001d032461_P001	Maize	plastid	40.85	38.41
Zm00001d052261_P001	Maize	cytosol, plasma membrane, plastid	28.52	38.39
Zm00001d037228_P001	Maize	cytosol, plasma membrane, plastid	38.38	37.07
Zm00001d044826_P001	Maize	cytosol, endoplasmic reticulum, plastid	39.08	36.88
Zm00001d024634_P001	Maize	cytosol, peroxisome, vacuole	32.39	32.97
Zm00001d049578_P001	Maize	golgi, plasma membrane, vacuole	32.39	31.08
Zm00001d040108_P001	Maize	plasma membrane	30.99	29.43

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	UniProt:A0A1D6M054	ProteinID:AQK84695.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS
PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF189	SUPFAM:SSF81338
TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI0002212DFF	EnsemblPlantsGene:Zm00001d037733	EnsemblPlants:Zm00001d037733_P001	EnsemblPlants:Zm00001d037733_T001
SEG:seg	:	:	:	:	:

Description

Aquaporin NIP-type

Coordinates

chr6:+:135558617..135560426

Molecular Weight (calculated)

29355.5 Da

IEP (calculated)

7.879

GRAVY (calculated)

0.524

Length

284 amino acids

Sequence
(BLAST)

001: MAGAEVANGV HDGALDLEEG RGGGVDGAGC ESSEQDGAGR RPMFSVPFVQ KILAEALGTY FLIFAGCAAV AVNLRTGGTV TFPGICAVWG LAVMVMVYSV
101: GHISGAHLNP AVSLAFATCG RFPWRQVPAY AAAQVTGATA ASLTLRLLFG SAREHFFGTV PAGSDAQSLV VEFIISFNLM FVVSGVATDN RAIGELAGLA
201: VGATVLLNVL FAGPISGASM NPARTLGPAL VVGRYAGIWV YFAGPICGTV AGAWAYNLIR FTDKPLREIT QTSSFLRSVR RSSS

Best Arabidopsis Sequence Match ( AT4G18910.1 )
(BLAST)

001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR

Arabidopsis Description

NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [peroxisome,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.