Factsheet for Zm00001d049578_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	secretory
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14542	Sorghum	golgi, peroxisome, vacuole	76.35	78.2
HORVU7Hr1G072160.1	Barley	extracellular, golgi	20.95	74.7
TraesCS7D01G299300.1	Wheat	plasma membrane	53.72	67.66
TraesCS7A01G303800.1	Wheat	plasma membrane	60.14	65.68
TraesCS7B01G204200.1	Wheat	plasma membrane, plastid, vacuole	59.8	63.9
TraesCS6A01G078300.1	Wheat	plasma membrane	59.8	62.11
TraesCS6B01G105300.1	Wheat	golgi, plasma membrane, vacuole	59.12	62.06
TraesCS6D01G072000.1	Wheat	plasma membrane	59.12	61.4
Zm00001d024634_P001	Maize	cytosol, peroxisome, vacuole	42.57	45.16
Zm00001d052261_P001	Maize	cytosol, plasma membrane, plastid	25.34	35.55
Zm00001d032461_P001	Maize	plastid	34.12	33.44
Zm00001d018037_P001	Maize	cytosol, peroxisome, plasma membrane	32.43	32.54
Zm00001d037733_P001	Maize	plasma membrane	31.08	32.39
Zm00001d016237_P001	Maize	cytosol, peroxisome, plasma membrane	29.05	30.5
Zm00001d037228_P001	Maize	cytosol, plasma membrane, plastid	29.73	29.93
Zm00001d044826_P001	Maize	cytosol, endoplasmic reticulum, plastid	29.73	29.24
Zm00001d040108_P001	Maize	plasma membrane	24.66	24.41
Zm00001d046303_P001	Maize	golgi, peroxisome, plasma membrane	25.0	23.34

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	ProteinID:AQK50832.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	UniProt:K7US20	InterPro:MIP	InterPro:MIP_CS
PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF159	SUPFAM:SSF81338
TMHMM:TMhelix	UniParc:UPI000220E42F	EnsemblPlantsGene:Zm00001d049578	EnsemblPlants:Zm00001d049578_P001	EnsemblPlants:Zm00001d049578_T001	SEG:seg

Description

Probable aquaporin NIP5-1

Coordinates

chr4:+:35941537..35942756

Molecular Weight (calculated)

30041.7 Da

IEP (calculated)

9.692

GRAVY (calculated)

0.636

Length

296 amino acids

Sequence
(BLAST)

001: MADDGRRRNV SMDFSVSIPS AAAASMLVDK ENTSDDRISI IIPHSRSPSS KILPLGFQRN EAPSDHSPAR PVSAKRVALA LTKKVAAELL GTFLLVFTVL
101: SALITNEAHG GALGVLGVAV AGGTAVVVVV SSIFHVSGGH VNPAVSVAMA VFGHLPPAHL ALYAAAQLLG SVAASFVAKA LYAGPANLLG PTVATVPSVG
201: ASQAFWVEFI TTFVVLFVVT ALATDPKAVK EMVAVGAGAA VMMSALISGE STGASMNPAR TLGTAIATGT YTKIWVYMVA PPLGAIAGCG AYHALK

Best Arabidopsis Sequence Match ( AT1G31885.1 )
(BLAST)

001: MAEISDITTQ TQTVVLDIEN YQSIDDSRSS DLSAPLVSVS FVQKLIGEFV GTFTMIFAGC SAIVVNETYG KPVTLPGIAL VWGLVVTVMI YSIGHVSGAH
101: FNPAVSIAFA SSKKFPFNQV PGYIAAQLLG STLAAAVLRL VFHLDDDVCS LKGDVYVGTY PSNSNTTSFV MEFIATFNLM FVISAVATDK RATGSFAGIA
201: IGATIVLDIL FSGPISGASM NPARSLGPAL IWGCYKDLWL YIVSPVIGAL SGAWTYGLLR STKKSYSEII RPNCNKVSSR DRQEASQDEI CVLRVVDPAN
301: QNYFICSSPT DINGKCNVTC KLA

Arabidopsis Description

NIP3-1Aquaporin NIP3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6T0]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.