Factsheet for TraesCS7D01G299300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
extracellular 2
endoplasmic reticulum 2
vacuole 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G303800.1	Wheat	plasma membrane	98.72	85.61
HORVU7Hr1G072160.1	Barley	extracellular, golgi	30.21	85.54
TraesCS7B01G204200.1	Wheat	plasma membrane, plastid, vacuole	94.47	80.14
TraesCS6D01G072000.1	Wheat	plasma membrane	72.77	60.0
TraesCS3D01G330000.1	Wheat	plasma membrane	58.72	56.1
EES14542	Sorghum	golgi, peroxisome, vacuole	67.66	55.02
Zm00001d049578_P001	Maize	golgi, plasma membrane, vacuole	67.66	53.72
TraesCS4D01G349700.1	Wheat	plasma membrane	59.15	53.67
TraesCS5D01G347600.1	Wheat	cytosol, golgi, plasma membrane	40.85	33.33
TraesCS1D01G176000.1	Wheat	plastid	42.13	33.11
TraesCS7D01G367800.1	Wheat	golgi, peroxisome, plasma membrane	38.72	32.62
TraesCS7D01G217400.1	Wheat	plasma membrane	37.87	32.01
TraesCS7D01G539500.1	Wheat	cytosol, golgi, plasma membrane	39.15	31.62
TraesCS6D01G286400.1	Wheat	golgi, peroxisome, plasma membrane	36.6	29.15
TraesCS7D01G188800.2	Wheat	plasma membrane	35.74	28.0
TraesCS3D01G139400.1	Wheat	plasma membrane	29.36	27.82
TraesCS3D01G002300.1	Wheat	plasma membrane	30.21	24.65

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0055085
InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221
PANTHER:PTHR19139	PANTHER:PTHR19139:SF159	SUPFAM:SSF81338	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7D01G299300	EnsemblPlants:TraesCS7D01G299300.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:379246362..379247331

Molecular Weight (calculated)

23799.7 Da

IEP (calculated)

9.302

GRAVY (calculated)

0.950

Length

235 amino acids

Sequence
(BLAST)

001: MAEPSPGGHS TLGAERAAVL LVKKMLAELL GTFLLLFVLL SALIMNATHD GALGLLGVAA TAGLAVTVLV ASLVHISGAH LNPAISVSMA VYGYLPRAHL
101: APYMAAQFLG AIAASFVAKA VYHPANPGAI VATVPTLGTA GTFLVEFLTT FVLLFVIVAH ATDPKAVKEL IAVAAGAAIM MNALISAEST GASMNPARTL
201: GTAIATGTYT KIWVYMVAPP LGAIAGTGAY IALKH

Best Arabidopsis Sequence Match ( AT1G31885.1 )
(BLAST)

001: MAEISDITTQ TQTVVLDIEN YQSIDDSRSS DLSAPLVSVS FVQKLIGEFV GTFTMIFAGC SAIVVNETYG KPVTLPGIAL VWGLVVTVMI YSIGHVSGAH
101: FNPAVSIAFA SSKKFPFNQV PGYIAAQLLG STLAAAVLRL VFHLDDDVCS LKGDVYVGTY PSNSNTTSFV MEFIATFNLM FVISAVATDK RATGSFAGIA
201: IGATIVLDIL FSGPISGASM NPARSLGPAL IWGCYKDLWL YIVSPVIGAL SGAWTYGLLR STKKSYSEII RPNCNKVSSR DRQEASQDEI CVLRVVDPAN
301: QNYFICSSPT DINGKCNVTC KLA

Arabidopsis Description

NIP3-1Aquaporin NIP3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6T0]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.