Factsheet for TraesCS7D01G217400.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, plasma membrane
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G215700.1	Wheat	plasma membrane	98.92	98.92
TraesCS7B01G122600.2	Wheat	plasma membrane	97.84	97.84
HORVU7Hr1G043590.2	Barley	plasma membrane	98.2	88.35
HORVU7Hr1G043600.1	Barley	golgi, peroxisome	98.2	85.58
Zm00001d016237_P001	Maize	cytosol, peroxisome, plasma membrane	85.97	84.75
Os02t0232900-01	Rice	cytoskeleton, cytosol, plasma membrane	86.33	84.51
EES06549	Sorghum	cytoskeleton, cytosol, peroxisome	85.61	82.93
GSMUA_Achr6P14730_001	Banana	plasma membrane	73.74	75.65
TraesCS7D01G539500.1	Wheat	cytosol, golgi, plasma membrane	70.86	67.7
TraesCS5D01G347600.1	Wheat	cytosol, golgi, plasma membrane	68.7	66.32
TraesCS7D01G367800.1	Wheat	golgi, peroxisome, plasma membrane	56.83	56.63
TraesCS3D01G139400.1	Wheat	plasma membrane	48.92	54.84
TraesCS7D01G299300.1	Wheat	plasma membrane	32.01	37.87
TraesCS6D01G286400.1	Wheat	golgi, peroxisome, plasma membrane	39.93	37.63
TraesCS1D01G176000.1	Wheat	plastid	40.29	37.46
TraesCS3D01G330000.1	Wheat	plasma membrane	33.09	37.4
TraesCS7D01G188800.2	Wheat	plasma membrane	39.57	36.67
TraesCS4D01G349700.1	Wheat	plasma membrane	33.45	35.91
TraesCS6D01G072000.1	Wheat	plasma membrane	32.37	31.58
TraesCS3D01G002300.1	Wheat	plasma membrane	29.5	28.47

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0055085
InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221
PANTHER:PTHR19139	PANTHER:PTHR19139:SF189	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7D01G217400
EnsemblPlants:TraesCS7D01G217400.1	TIGR:cd00333	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7D:-:178008700..178010533

Molecular Weight (calculated)

29566.1 Da

IEP (calculated)

9.588

GRAVY (calculated)

0.393

Length

278 amino acids

Sequence
(BLAST)

001: MAGGGDNSQT NGGSQEPRAM EEGRKEDYDQ GCGLAISLPF VQKIIAEIFG TYFLIFAGCG AVTVNKSKGQ ITFPGVAIVW GLTVMVMVYS VGHISGAHFN
101: PAVTFAFATV RRFPWRQVPA YVLAQMLGAT LASGTLRLMF GGRHEHFPGT LPTGSDVQSL VLEFIITFYL MFVISGVSTD NRAIGELAGL AVGATILLNV
201: LIAGPVSGAS MNPARTVGPA LIGSEYRSIW VYVVGPVAGA VAGAWAYNLI RFTNKPLREI TKSTSFLRSM SRMNSVSV

Best Arabidopsis Sequence Match ( AT4G18910.1 )
(BLAST)

001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR

Arabidopsis Description

NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [peroxisome,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.