Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G122600.2 | Wheat | plasma membrane | 89.0 | 98.92 |
| TraesCS7D01G217400.1 | Wheat | plasma membrane | 88.35 | 98.2 |
| TraesCS7A01G215700.1 | Wheat | plasma membrane | 88.03 | 97.84 |
| HORVU7Hr1G043600.1 | Barley | golgi, peroxisome | 100.0 | 96.87 |
| Zm00001d016237_P001 | Maize | cytosol, peroxisome, plasma membrane | 78.64 | 86.17 |
| Os02t0232900-01 | Rice | cytoskeleton, cytosol, plasma membrane | 78.32 | 85.21 |
| EES06549 | Sorghum | cytoskeleton, cytosol, peroxisome | 78.32 | 84.32 |
| GSMUA_Achr6P14730_001 | Banana | plasma membrane | 66.99 | 76.38 |
| HORVU7Hr1G121250.3 | Barley | cytosol, golgi, plasma membrane | 64.4 | 68.15 |
| HORVU5Hr1G085710.3 | Barley | cytosol, peroxisome, plasma membrane | 63.43 | 58.86 |
| HORVU7Hr1G072160.1 | Barley | extracellular, golgi | 11.0 | 40.96 |
| HORVU7Hr1G088900.1 | Barley | cytosol, golgi, plasma membrane | 27.83 | 40.76 |
| HORVU3Hr1G079560.5 | Barley | golgi, plasma membrane | 31.07 | 38.87 |
| HORVU3Hr1G014440.3 | Barley | golgi, mitochondrion, plasma membrane | 32.36 | 38.76 |
| HORVU7Hr1G038220.1 | Barley | endoplasmic reticulum, golgi, peroxisome | 35.92 | 37.0 |
| HORVU0Hr1G017130.2 | Barley | endoplasmic reticulum, golgi, peroxisome | 14.56 | 30.0 |
| HORVU6Hr1G075850.4 | Barley | nucleus, plasma membrane, vacuole | 28.48 | 27.67 |
| HORVU1Hr1G047100.3 | Barley | plastid | 32.04 | 26.98 |
| HORVU7Hr1G038270.3 | Barley | endoplasmic reticulum, golgi, vacuole | 25.89 | 21.86 |
| HORVU3Hr1G001320.1 | Barley | plasma membrane, vacuole | 18.77 | 20.94 |
| HORVU3Hr1G001420.2 | Barley | nucleus | 12.3 | 17.43 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.1 | UniProt:A0A287W9C5 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | EnsemblPlantsGene:HORVU7Hr1G043590 | EnsemblPlants:HORVU7Hr1G043590.2 | InterPro:IPR023271 | InterPro:MIP |
| InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF189 |
| SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | UniParc:UPI000B47718D | SEG:seg | : |
Description
No Description!
Coordinates
chrchr7H:-:133179343..133182208
Molecular Weight (calculated)
33117.3 Da
IEP (calculated)
8.665
GRAVY (calculated)
0.404
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: SHISVVSTHH FLSSLWFTPV FPPHIWALEE EMAGGGDNSQ TNGGAQEPRA MEEGRKEDYD QGCGLAISLP FVQKIIAEIF GTYFLIFAGC GAVTINKSKG
101: QITFPGVAIV WGLAVMVMVY SVGHISGAHF NPAVTFAFAT VRRFPWRQVP AYVLAQMLGA TLASGTLRLM FGGRHEHFPG TLPTGSDVQS LVLEFIITFY
201: LMFVISGVAT DNRAIGELAG LAVGATILLN VLIAGPVSGA SMNPARTVGP ALVGSEYRSI WVYVVGPVAG AVAGAWAYNL IRFTNKPLRE ITKSTSFLRS
301: MSRMNSVSV
101: QITFPGVAIV WGLAVMVMVY SVGHISGAHF NPAVTFAFAT VRRFPWRQVP AYVLAQMLGA TLASGTLRLM FGGRHEHFPG TLPTGSDVQS LVLEFIITFY
201: LMFVISGVAT DNRAIGELAG LAVGATILLN VLIAGPVSGA SMNPARTVGP ALVGSEYRSI WVYVVGPVAG AVAGAWAYNL IRFTNKPLRE ITKSTSFLRS
301: MSRMNSVSV
001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR
Arabidopsis Description
NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [peroxisome,golgi,vacuole]
SUBAcon: [peroxisome,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.