Factsheet for HORVU5Hr1G085710.3

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G342100.1	Wheat	cytosol, golgi, plasma membrane	81.68	94.44
TraesCS5A01G342900.1	Wheat	golgi, peroxisome, plasma membrane	81.68	94.12
TraesCS5D01G347600.1	Wheat	cytosol, golgi, plasma membrane	81.38	94.1
HORVU7Hr1G121250.3	Barley	cytosol, golgi, plasma membrane	77.78	88.7
Zm00001d037733_P001	Maize	plasma membrane	69.07	80.99
OQU77604	Sorghum	plasma membrane	67.57	79.51
Os05t0205050-00	Rice	cytosol, peroxisome, plastid	49.25	75.93
Os05t0205000-01	Rice	cytosol	17.42	65.91
HORVU7Hr1G043590.2	Barley	plasma membrane	58.86	63.43
HORVU7Hr1G043600.1	Barley	golgi, peroxisome	58.86	61.44
HORVU3Hr1G079560.5	Barley	golgi, plasma membrane	32.43	43.72
HORVU3Hr1G014440.3	Barley	golgi, mitochondrion, plasma membrane	31.83	41.09
GSMUA_Achr10P...	Banana	cytosol, extracellular, plastid	30.93	40.87
HORVU7Hr1G072160.1	Barley	extracellular, golgi	9.31	37.35
HORVU7Hr1G038220.1	Barley	endoplasmic reticulum, golgi, peroxisome	33.63	37.33
HORVU7Hr1G088900.1	Barley	cytosol, golgi, plasma membrane	23.42	36.97
HORVU0Hr1G017130.2	Barley	endoplasmic reticulum, golgi, peroxisome	14.11	31.33
HORVU6Hr1G075850.4	Barley	nucleus, plasma membrane, vacuole	28.23	29.56
HORVU1Hr1G047100.3	Barley	plastid	31.83	28.88
HORVU7Hr1G038270.3	Barley	endoplasmic reticulum, golgi, vacuole	24.62	22.4
HORVU3Hr1G001320.1	Barley	plasma membrane, vacuole	17.72	21.3
HORVU3Hr1G001420.2	Barley	nucleus	11.41	17.43

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	EMBL:AB540231	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	UniProt:D2KZ48
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:HORVU5Hr1G085710	EnsemblPlants:HORVU5Hr1G085710.3	InterPro:IPR023271
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF189	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI0001C238B5	SEG:seg

Description

Nodulin-26 like intrinsic protein [Source:UniProtKB/TrEMBL;Acc:D2KZ48]

Coordinates

chrchr5H:-:575459585..575465363

Molecular Weight (calculated)

35345.6 Da

IEP (calculated)

8.620

GRAVY (calculated)

0.144

Length

333 amino acids

Sequence
(BLAST)

001: MEPINSRSIL INTRIQTRDR DRDRDRDRQP DKERGMKGES GSARMAGGGG EHGANGLQEQ DHAGALEEGR GGANHPAGCE NSEQDLISTS NQPMISVQFV
101: QKVLAEILGT YLLIFAGCAA VAVNKRTAGT VTFPGICITW GLAVMVMVYS VGHISGAHLN PAVTLAFATC GRFPWRQVPA YAAAQVVGST AASLTLRLLF
201: GSEPEHFFGT VPAGSDVQSL VLEFIITFYL MFVISGVATD NRAIGELAGL AVGATVLLNV LFAGPISGAS MNPARTIGPA MVAGRYTSIW LYIVGPISGA
301: VAGAWAYNLI RFTNKPLREI TRTGSFLRSA RMS

Best Arabidopsis Sequence Match ( AT4G18910.1 )
(BLAST)

001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR

Arabidopsis Description

NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [peroxisome,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.