Factsheet for TraesCS5A01G342900.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane
Any Predictor:	golgi, peroxisome, plasma membrane
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G347600.1	Wheat	cytosol, golgi, plasma membrane	97.58	97.92
TraesCS5B01G342100.1	Wheat	cytosol, golgi, plasma membrane	96.19	96.53
TraesCS7A01G553000.1	Wheat	cytosol, golgi, plasma membrane	92.04	91.72
HORVU5Hr1G085710.3	Barley	cytosol, peroxisome, plasma membrane	94.12	81.68
Zm00001d037733_P001	Maize	plasma membrane	78.89	80.28
OQU77604	Sorghum	plasma membrane	77.16	78.8
Os05t0205050-00	Rice	cytosol, peroxisome, plastid	54.67	73.15
Os05t0205000-01	Rice	cytosol	21.11	69.32
TraesCS7A01G215700.1	Wheat	plasma membrane	65.4	67.99
TraesCS3A01G139100.3	Wheat	plasma membrane	58.82	58.42
TraesCS7A01G355000.1	Wheat	peroxisome	50.17	51.97
TraesCS5A01G525500.1	Wheat	plasma membrane	37.37	41.7
TraesCS1A01G177500.1	Wheat	plastid	42.56	41.0
GSMUA_Achr10P...	Banana	cytosol, extracellular, plastid	35.29	40.48
TraesCS6A01G307300.1	Wheat	endoplasmic reticulum, golgi, peroxisome	40.48	39.66
TraesCS7A01G187800.1	Wheat	endoplasmic reticulum, golgi, peroxisome	40.14	38.67
TraesCS7A01G303800.1	Wheat	plasma membrane	33.91	36.16
TraesCS6A01G078300.1	Wheat	plasma membrane	34.26	34.74
TraesCS3A01G008700.1	Wheat	plasma membrane	29.76	29.86

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0055085
InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221
PANTHER:PTHR19139	PANTHER:PTHR19139:SF189	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5A01G342900
EnsemblPlants:TraesCS5A01G342900.1	TIGR:cd00333	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5A:+:547719277..547723097

Molecular Weight (calculated)

30117.4 Da

IEP (calculated)

6.665

GRAVY (calculated)

0.428

Length

289 amino acids

Sequence
(BLAST)

001: MAGGEHGANG LQPQEQDHTG ALEEGRGGAN QPAGCEDSEQ ALSSTANQPM ISVQFVQKVL AEIMGTYLLI FAGCAAVAVN QRTAGTVTFP GVCITWGLAV
101: MVMVYSVGHI SGAHLNPAVT LAFATCGRFP WIQVPAYAAA QVTGSTAASL TLRLLFGSEP EHFFGTVPSG SDVQSLVLEF IITFYLMFVI SGVATDNRAI
201: GELAGLAVGA TVLLNVLFAG PISGASMNPA RTIGPAMVAG RYTGIWVYIV GPVSGAVAGA WAYNLIRFTN KPLREITRTG SFLRSARMS

Best Arabidopsis Sequence Match ( AT5G37820.2 )
(BLAST)

001: MYKSSSTSKF STHQKFQFLF YFSPNKKLTS TFFLKKMTSH GEEIEDEQIS RIEKGNCKDS QGGMETAICS SPSIVCLTQK LIAEMIGTYF IIFSGCGVVV
101: VNVLYGGTIT FPGICVTWGL IVMVMIYSTG HISGAHFNPA VTVTFAVFRR FPWYQVPLYI GAQLTGSLLA SLTLRLMFNV TPKAFFGTTP TDSSGQALVA
201: EIIISFLLMF VISGVATDSR ATGELAGIAV GMTIILNVFV AGPISGASMN PARSLGPAIV MGRYKGIWVY IVGPFVGIFA GGFVYNFMRF TDKPLRELTK
301: SASFLRSVAQ KDNASKSDG

Arabidopsis Description

NIP4;2NOD26-like intrinsic protein 4;2 [Source:TAIR;Acc:AT5G37820]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.