Factsheet for TraesCS3A01G139100.3

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, peroxisome, plasma membrane
MultiLoc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G156700.1	Wheat	plasma membrane	78.69	85.45
TraesCS3D01G139400.1	Wheat	plasma membrane	58.76	68.95
KXG31601	Sorghum	golgi, plasma membrane, plastid	65.98	68.09
Os01t0202800-00	Rice	cytosol, plasma membrane, plastid	59.45	64.79
TraesCS5A01G342900.1	Wheat	golgi, peroxisome, plasma membrane	58.42	58.82
TraesCS7A01G553000.1	Wheat	cytosol, golgi, plasma membrane	58.42	58.62
TraesCS7A01G215700.1	Wheat	plasma membrane	55.33	57.91
TraesCS7A01G355000.1	Wheat	peroxisome	45.02	46.95
TraesCS5A01G525500.1	Wheat	plasma membrane	35.05	39.38
TraesCS1A01G177500.1	Wheat	plastid	38.14	37.0
GSMUA_Achr10P...	Banana	cytosol, extracellular, plastid	30.24	34.92
TraesCS6A01G307300.1	Wheat	endoplasmic reticulum, golgi, peroxisome	34.02	33.56
TraesCS7A01G187800.1	Wheat	endoplasmic reticulum, golgi, peroxisome	34.36	33.33
TraesCS6A01G078300.1	Wheat	plasma membrane	30.58	31.23
TraesCS7A01G303800.1	Wheat	plasma membrane	27.49	29.52
TraesCS3A01G008700.1	Wheat	plasma membrane	27.84	28.12

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0055085
InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221
PANTHER:PTHR19139	PANTHER:PTHR19139:SF184	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3A01G139100
EnsemblPlants:TraesCS3A01G139100.3	TIGR:cd00333	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3A:+:116525749..116527012

Molecular Weight (calculated)

30715.5 Da

IEP (calculated)

8.205

GRAVY (calculated)

0.552

Length

291 amino acids

Sequence
(BLAST)

001: MEEGQDVKEA TSKNSEDWGS TNNNSRCDGG DMISVQFMQK VYTPICVLAV CSSVLRRTNF AGRVVLVLRR FEQILAEILG TYFMILAGCG SVVVNQSTGG
101: AVTFPGICVV WGLVVMVMVY SVGHVSGAHF NPAVTIAFAT CRRFPWKQVP SYVLAQVLGS TLASLTLRLT FGGAHGHFLG TTPSGSSTQA VALEFIISFY
201: LMFVVSGVAT DDRAVGELAG LAVGATVVLN VLFAGPITGA SMNPARSLGP AIVACQFGSV WVYIVGPVCG TVAGAWTYNL IRLPGKAVRN D

Best Arabidopsis Sequence Match ( AT4G18910.1 )
(BLAST)

001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR

Arabidopsis Description

NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [peroxisome,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.