Factsheet for TraesCS5A01G525500.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, plasma membrane
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G349700.1	Wheat	plasma membrane	95.75	95.75
TraesCS3B01G368100.1	Wheat	plasma membrane	80.69	84.62
HORVU3Hr1G079560.5	Barley	golgi, plasma membrane	79.54	83.4
Os08t0152100-00	Rice	endoplasmic reticulum, plasma membrane, vacuole	62.16	75.94
OQU79872	Sorghum	cytosol, peroxisome, vacuole	66.41	57.91
Os08t0152000-01	Rice	cytosol, plasma membrane, plastid	66.02	56.07
TraesCS6A01G078300.1	Wheat	plasma membrane	58.3	52.98
TraesCS7A01G303800.1	Wheat	plasma membrane	54.44	52.03
Os12t0204100-01	Rice	cytosol, peroxisome, plastid	57.14	50.86
TraesCS5A01G342900.1	Wheat	golgi, peroxisome, plasma membrane	41.7	37.37
TraesCS1A01G177500.1	Wheat	plastid	42.86	37.0
TraesCS7A01G553000.1	Wheat	cytosol, golgi, plasma membrane	40.15	35.86
TraesCS3A01G139100.3	Wheat	plasma membrane	39.38	35.05
TraesCS7A01G215700.1	Wheat	plasma membrane	35.91	33.45
TraesCS7A01G355000.1	Wheat	peroxisome	33.59	31.18
TraesCS6A01G307300.1	Wheat	endoplasmic reticulum, golgi, peroxisome	34.36	30.17
TraesCS7A01G187800.1	Wheat	endoplasmic reticulum, golgi, peroxisome	34.75	30.0
TraesCS3A01G008700.1	Wheat	plasma membrane	26.64	23.96

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0055085
InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221
PANTHER:PTHR19139	PANTHER:PTHR19139:SF159	SUPFAM:SSF81338	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5A01G525500	EnsemblPlants:TraesCS5A01G525500.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:685869424..685870509

Molecular Weight (calculated)

27150.0 Da

IEP (calculated)

7.886

GRAVY (calculated)

0.725

Length

259 amino acids

Sequence
(BLAST)

001: MGSMIVPMEP INHVDADGDP PPPSSEHDST RPRRRQPKFP NMAAVPLMKK VMAEFLGTFI LMFIQVSSII MDEQHHGVVG LMGIAVSVGL AVMVLVFSII
101: HISGCHLNPA VSIAMGVFGH LPPAHLVPYI AAQVLGSTAA SFAGNAIYHP VNPGITTIPS VGTVEAFAVE FIITFILLFV IIAVATDPHA VKKLIAVAVG
201: ATVVMNILMA GPSTGASMNP ARTIGPAIAT GRYTKIWVYL VAEPLGAIAG VGSYMAIKL

Best Arabidopsis Sequence Match ( AT4G10380.1 )
(BLAST)

001: MAPPEAEVGA VMVMAPPTPG TPGTPGGPLI TGMRVDSMSF DHRKPTPRCK CLPVMGSTWG QHDTCFTDFP SPDVSLTRKL GAEFVGTFIL IFTATAGPIV
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR

Arabidopsis Description

NIP5-1At4g10380 [Source:UniProtKB/TrEMBL;Acc:A3KPG0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.