Factsheet for TraesCS7A01G303800.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plasma membrane, plastid
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G299300.1	Wheat	plasma membrane	85.61	98.72
TraesCS7B01G204200.1	Wheat	plasma membrane, plastid, vacuole	95.57	93.5
HORVU7Hr1G072160.1	Barley	extracellular, golgi	26.2	85.54
TraesCS6A01G078300.1	Wheat	plasma membrane	68.63	65.26
EES14542	Sorghum	golgi, peroxisome, vacuole	65.68	61.59
Zm00001d049578_P001	Maize	golgi, plasma membrane, vacuole	65.68	60.14
TraesCS5A01G525500.1	Wheat	plasma membrane	52.03	54.44
TraesCS1A01G177500.1	Wheat	plastid	38.75	35.0
TraesCS5A01G342900.1	Wheat	golgi, peroxisome, plasma membrane	36.16	33.91
TraesCS7A01G355000.1	Wheat	peroxisome	33.95	32.97
TraesCS7A01G215700.1	Wheat	plasma membrane	33.21	32.37
TraesCS7A01G553000.1	Wheat	cytosol, golgi, plasma membrane	34.32	32.07
TraesCS6A01G307300.1	Wheat	endoplasmic reticulum, golgi, peroxisome	33.95	31.19
TraesCS7A01G187800.1	Wheat	endoplasmic reticulum, golgi, peroxisome	32.47	29.33
TraesCS3A01G139100.3	Wheat	plasma membrane	29.52	27.49
TraesCS3A01G008700.1	Wheat	plasma membrane	25.46	23.96

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0055085
InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221
PANTHER:PTHR19139	PANTHER:PTHR19139:SF159	SUPFAM:SSF81338	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7A01G303800	EnsemblPlants:TraesCS7A01G303800.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7A:+:427612059..427613126

Molecular Weight (calculated)

27653.3 Da

IEP (calculated)

9.570

GRAVY (calculated)

0.762

Length

271 amino acids

Sequence
(BLAST)

001: MDVSLSIPAA RGVGDDTDRR APRNSPSFKI VPLHDEMAKP SPGGHATLGA ERAAVLLVKK VLAELLGTFL LLFVLLSALI MNATHDGALG LLGVAATAGL
101: AVTVLVASLV HISGAHLNPA ISVSMAVYGY LPRAHLAPYM AAQFLGAIAA SFVAKAVYHP ANPGAIVATV PTLGTAGTFL VEFLTTFVLL FVIVAHATDP
201: KAVKELIAVA AGAAIMMNAL ISAESTGASM NPARTLGTAI ATGTYTKIWV YMVAPPLGAI AGTGAYIALK H

Best Arabidopsis Sequence Match ( AT1G31885.1 )
(BLAST)

001: MAEISDITTQ TQTVVLDIEN YQSIDDSRSS DLSAPLVSVS FVQKLIGEFV GTFTMIFAGC SAIVVNETYG KPVTLPGIAL VWGLVVTVMI YSIGHVSGAH
101: FNPAVSIAFA SSKKFPFNQV PGYIAAQLLG STLAAAVLRL VFHLDDDVCS LKGDVYVGTY PSNSNTTSFV MEFIATFNLM FVISAVATDK RATGSFAGIA
201: IGATIVLDIL FSGPISGASM NPARSLGPAL IWGCYKDLWL YIVSPVIGAL SGAWTYGLLR STKKSYSEII RPNCNKVSSR DRQEASQDEI CVLRVVDPAN
301: QNYFICSSPT DINGKCNVTC KLA

Arabidopsis Description

NIP3-1Aquaporin NIP3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6T0]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.