Factsheet for TraesCS3B01G156700.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, plasma membrane
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G139100.3	Wheat	plasma membrane	85.45	78.69
TraesCS3D01G139400.1	Wheat	plasma membrane	68.66	74.19
Os01t0202800-00	Rice	cytosol, plasma membrane, plastid	67.91	68.16
KXG31601	Sorghum	golgi, plasma membrane, plastid	71.27	67.73
TraesCS5B01G342100.1	Wheat	cytosol, golgi, plasma membrane	65.67	61.11
TraesCS7B01G476700.1	Wheat	cytosol, golgi, plasma membrane	66.04	60.82
TraesCS7B01G122600.2	Wheat	plasma membrane	61.57	59.35
TraesCS7B01G272700.1	Wheat	plasma membrane	48.51	46.59
TraesCS3B01G368100.1	Wheat	plasma membrane	36.94	40.08
TraesCS1B01G202700.1	Wheat	plastid	41.42	37.25
GSMUA_Achr10P...	Banana	cytosol, extracellular, plastid	33.96	36.11
TraesCS6B01G335900.1	Wheat	golgi, peroxisome, plasma membrane	38.81	35.25
TraesCS7B01G092900.1	Wheat	endoplasmic reticulum, golgi, peroxisome	38.43	34.33
TraesCS6B01G105300.1	Wheat	golgi, plasma membrane, vacuole	33.21	31.56
TraesCS7B01G204200.1	Wheat	plasma membrane, plastid, vacuole	29.48	28.52

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0055085
InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221
PANTHER:PTHR19139	PANTHER:PTHR19139:SF184	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3B01G156700
EnsemblPlants:TraesCS3B01G156700.1	TIGR:cd00333	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3B:+:149463053..149464218

Molecular Weight (calculated)

27976.9 Da

IEP (calculated)

7.369

GRAVY (calculated)

0.489

Length

268 amino acids

Sequence
(BLAST)

001: MEEGRDEKEA TSENSEDRGN TSDSSRCDGS GLMSVQFMQK ILAEILGTYF MILAGCGAVV VNQSTGGAVT FPGICVVWGL VVMVMVYSVG HVSGAHFNPA
101: VTIAFATCRR FPWKQVPSYV LAQVLGSTLA SLTLRLTFGG AHGHSFGTMP SGSSTQAVAL EFIISFYLMF VVSGVGTDDR AVGELAGLAV GATVVLNVLF
201: AGPITGASMN SARSLGPAIV ACRYGGVWVY VVGPVCGTVA AAWTYNLIRL PDKPIARSGS TASFLRPL

Best Arabidopsis Sequence Match ( AT4G18910.1 )
(BLAST)

001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR

Arabidopsis Description

NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [peroxisome,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.