Factsheet for TraesCS6B01G105300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	secretory
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G072000.1	Wheat	plasma membrane	93.62	92.63
TraesCS6A01G078300.1	Wheat	plasma membrane	93.26	92.28
TraesCS7B01G204200.1	Wheat	plasma membrane, plastid, vacuole	67.02	68.23
EES14542	Sorghum	golgi, peroxisome, vacuole	63.12	61.59
Zm00001d049578_P001	Maize	golgi, plasma membrane, vacuole	62.06	59.12
TraesCS3B01G368100.1	Wheat	plasma membrane	49.65	56.68
TraesCS1B01G202700.1	Wheat	plastid	39.72	37.58
TraesCS5B01G342100.1	Wheat	cytosol, golgi, plasma membrane	34.75	34.03
TraesCS7B01G122600.2	Wheat	plasma membrane	33.33	33.81
TraesCS3B01G156700.1	Wheat	plasma membrane	31.56	33.21
TraesCS7B01G476700.1	Wheat	cytosol, golgi, plasma membrane	33.33	32.3
TraesCS6B01G335900.1	Wheat	golgi, peroxisome, plasma membrane	33.69	32.2
TraesCS7B01G092900.1	Wheat	endoplasmic reticulum, golgi, peroxisome	32.62	30.67
TraesCS7B01G272700.1	Wheat	plasma membrane	29.08	29.39

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0055085
InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221
PANTHER:PTHR19139	PANTHER:PTHR19139:SF159	SUPFAM:SSF81338	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6B01G105300	EnsemblPlants:TraesCS6B01G105300.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:84848034..84849297

Molecular Weight (calculated)

29133.7 Da

IEP (calculated)

7.954

GRAVY (calculated)

0.682

Length

282 amino acids

Sequence
(BLAST)

001: MEESRARGVD ISLNINPAFS MDSTSDARAT PVMMPRRSTS VKIVPIASDD ENEKSPSPDP RRAVVHLVKK AMAEFLGTFL LVFIVLSAAI MNEIHGGALG
101: LLGVAATAGA AGVVIVASLF HVSGSHLNPS VSVAMAVFGY LPWAHLTPYV SAQFLGAVSA SFVAKAIYHP AANLSAVVTT VPSIGTLEAF SIEFIITFIL
201: LFAIIAVATD PKAVKELVAV AAGAALMTNV LIAAESTGAS MNPARTLGTA IATGTYTKIW VYMVAPPLGA IAGTGAYVAL KH

Best Arabidopsis Sequence Match ( AT1G80760.1 )
(BLAST)

001: MDHEEIPSTP STPATTPGTP GAPLFGGFEG KRNGHNGRYT PKSLLKSCKC FSVDNEWALE DGRLPPVTCS LPPPNVSLYR KLGAEFVGTL ILIFAGTATA
101: IVNQKTDGAE TLIGCAASAG LAVMIVILST GHISGAHLNP AVTIAFAALK HFPWKHVPVY IGAQVMASVS AAFALKAVFE PTMSGGVTVP TVGLSQAFAL
201: EFIISFNLMF VVTAVATDTR AVGELAGIAV GATVMLNILI AGPATSASMN PVRTLGPAIA ANNYRAIWVY LTAPILGALI GAGTYTIVKL PEEDEAPKER
301: RSFRR

Arabidopsis Description

NIP6-1Aquaporin NIP6-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAI4]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.