Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
20353092
|
gfp PMID:
20353092
Institute of Genetics and Developmental Biology, Chinese Academy ofSciences, Beijing 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G187800.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 99.67 | 99.67 |
| TraesCS7B01G092900.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 99.0 | 99.0 |
| HORVU7Hr1G038220.1 | Barley | endoplasmic reticulum, golgi, peroxisome | 97.0 | 97.0 |
| Os06t0228200-01 | Rice | plasma membrane | 86.0 | 86.58 |
| EER89472 | Sorghum | cytosol, plasma membrane, plastid | 84.33 | 85.76 |
| Zm00001d037228_P001 | Maize | cytosol, plasma membrane, plastid | 83.67 | 85.37 |
| Zm00001d044826_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 83.0 | 82.72 |
| TraesCS6D01G286400.1 | Wheat | golgi, peroxisome, plasma membrane | 76.33 | 77.63 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, peroxisome, plasma membrane | 61.0 | 62.46 |
| GSMUA_Achr5P23340_001 | Banana | peroxisome | 61.0 | 62.46 |
| VIT_14s0108g00700.t01 | Wine grape | peroxisome | 56.33 | 57.48 |
| GSMUA_Achr9P27460_001 | Banana | cytosol, peroxisome, plasma membrane | 57.0 | 56.81 |
| PGSC0003DMT400035640 | Potato | endoplasmic reticulum, extracellular | 33.33 | 56.18 |
| Solyc03g013340.2.1 | Tomato | cytosol | 52.67 | 55.83 |
| GSMUA_Achr6P02660_001 | Banana | cytosol, endoplasmic reticulum, golgi, mitochondrion | 59.67 | 55.42 |
| PGSC0003DMT400035638 | Potato | cytosol, golgi, plasma membrane | 21.67 | 49.24 |
| KRH40096 | Soybean | plastid | 45.0 | 46.08 |
| KRH01175 | Soybean | plastid | 44.67 | 45.42 |
| TraesCS5D01G347600.1 | Wheat | cytosol, golgi, plasma membrane | 38.0 | 39.58 |
| TraesCS7D01G217400.1 | Wheat | plasma membrane | 36.67 | 39.57 |
| TraesCS1D01G176000.1 | Wheat | plastid | 39.0 | 39.13 |
| TraesCS7D01G539500.1 | Wheat | cytosol, golgi, plasma membrane | 37.33 | 38.49 |
| TraesCS3D01G139400.1 | Wheat | plasma membrane | 31.67 | 38.31 |
| TraesCS7D01G367800.1 | Wheat | golgi, peroxisome, plasma membrane | 35.33 | 37.99 |
| TraesCS7D01G299300.1 | Wheat | plasma membrane | 28.0 | 35.74 |
| TraesCS3D01G330000.1 | Wheat | plasma membrane | 28.33 | 34.55 |
| TraesCS4D01G349700.1 | Wheat | plasma membrane | 29.33 | 33.98 |
| TraesCS6D01G072000.1 | Wheat | plasma membrane | 30.0 | 31.58 |
| TraesCS3D01G002300.1 | Wheat | plasma membrane | 26.33 | 27.43 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.1 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 |
| PANTHER:PTHR19139 | PANTHER:PTHR19139:SF142 | SUPFAM:SSF81338 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS7D01G188800 | EnsemblPlants:TraesCS7D01G188800.2 |
| TIGR:cd00333 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:-:141185574..141188689
Molecular Weight (calculated)
32273.1 Da
IEP (calculated)
7.593
GRAVY (calculated)
0.404
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVTSNTPTR ANSRVNYSNE IHDLSTVQDG APSLAPSMYY QEKSFADFFP PHLGKKVISE MVATFLLVFV TCGAASIYGA DVTRVSQLGQ SVVGGLIVTV
101: MIYATGHISG AHMNPAVTLS FACFRHFPWI QVPFYWAAQF TGAMCAAFVL RAVLHPITVL GTTTPTGPHW HALVIEIIVT FNMMFITCAV ATDSRAVGEL
201: AGLAVGSAVC ITSIFAGPVS GGSMNPARTL APAVASGVYT GLWIYFLGPV IGTLSGAWVY TYIRFEEEPS VKDGPQKLSS FKLRRLQSQR SMAVDEFDHV
101: MIYATGHISG AHMNPAVTLS FACFRHFPWI QVPFYWAAQF TGAMCAAFVL RAVLHPITVL GTTTPTGPHW HALVIEIIVT FNMMFITCAV ATDSRAVGEL
201: AGLAVGSAVC ITSIFAGPVS GGSMNPARTL APAVASGVYT GLWIYFLGPV IGTLSGAWVY TYIRFEEEPS VKDGPQKLSS FKLRRLQSQR SMAVDEFDHV
001: MAPPEAEVGA VMVMAPPTPG TPGTPGGPLI TGMRVDSMSF DHRKPTPRCK CLPVMGSTWG QHDTCFTDFP SPDVSLTRKL GAEFVGTFIL IFTATAGPIV
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR
Arabidopsis Description
NIP5-1At4g10380 [Source:UniProtKB/TrEMBL;Acc:A3KPG0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.