Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g013340.2.1 | Tomato | cytosol | 91.01 | 57.24 |
| VIT_14s0108g00700.t01 | Wine grape | peroxisome | 76.4 | 46.26 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, peroxisome, plasma membrane | 59.55 | 36.18 |
| GSMUA_Achr5P23340_001 | Banana | peroxisome | 59.55 | 36.18 |
| Zm00001d037228_P001 | Maize | cytosol, plasma membrane, plastid | 57.3 | 34.69 |
| EER89472 | Sorghum | cytosol, plasma membrane, plastid | 56.74 | 34.24 |
| TraesCS6A01G307300.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 56.18 | 33.9 |
| TraesCS6D01G286400.1 | Wheat | golgi, peroxisome, plasma membrane | 56.18 | 33.9 |
| Os06t0228200-01 | Rice | plasma membrane | 56.74 | 33.89 |
| EES07262 | Sorghum | cytosol, peroxisome, plasma membrane | 56.18 | 33.67 |
| Zm00001d018037_P001 | Maize | cytosol, peroxisome, plasma membrane | 55.62 | 33.56 |
| TraesCS6B01G335900.1 | Wheat | golgi, peroxisome, plasma membrane | 55.62 | 33.56 |
| Zm00001d044826_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 56.74 | 33.55 |
| HORVU7Hr1G038220.1 | Barley | endoplasmic reticulum, golgi, peroxisome | 56.18 | 33.33 |
| TraesCS7D01G188800.2 | Wheat | plasma membrane | 56.18 | 33.33 |
| TraesCS7B01G092900.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 56.18 | 33.33 |
| TraesCS7A01G187800.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 56.18 | 33.33 |
| Os02t0745100-01 | Rice | plasma membrane, vacuole | 54.49 | 32.55 |
| GSMUA_Achr6P02660_001 | Banana | cytosol, endoplasmic reticulum, golgi, mitochondrion | 58.43 | 32.2 |
| GSMUA_Achr9P27460_001 | Banana | cytosol, peroxisome, plasma membrane | 53.93 | 31.89 |
| KRH40096 | Soybean | plastid | 51.69 | 31.4 |
| KRH01175 | Soybean | plastid | 51.69 | 31.19 |
| Zm00001d052261_P001 | Maize | cytosol, plasma membrane, plastid | 33.15 | 27.96 |
| PGSC0003DMT400078337 | Potato | plasma membrane | 41.01 | 26.84 |
| PGSC0003DMT400073246 | Potato | plasma membrane | 41.57 | 25.52 |
| PGSC0003DMT400078773 | Potato | cytoskeleton, cytosol, plasma membrane | 38.2 | 25.47 |
| PGSC0003DMT400071510 | Potato | plasma membrane | 38.76 | 24.91 |
| PGSC0003DMT400036625 | Potato | plasma membrane | 42.7 | 24.84 |
| HORVU6Hr1G075850.4 | Barley | nucleus, plasma membrane, vacuole | 41.01 | 22.96 |
| PGSC0003DMT400014852 | Potato | cytosol, plasma membrane, plastid | 37.64 | 22.64 |
| PGSC0003DMT400022061 | Potato | peroxisome, plasma membrane, plastid, vacuole | 28.09 | 19.23 |
| PGSC0003DMT400084932 | Potato | plasma membrane | 27.53 | 17.07 |
| PGSC0003DMT400015246 | Potato | endoplasmic reticulum, peroxisome, plasma membrane | 32.02 | 16.43 |
| HORVU7Hr1G038270.3 | Barley | endoplasmic reticulum, golgi, vacuole | 33.15 | 16.12 |
| PGSC0003DMT400073240 | Potato | cytosol, plasma membrane, vacuole | 15.17 | 14.92 |
| PGSC0003DMT400035638 | Potato | cytosol, golgi, plasma membrane | 4.49 | 6.06 |
| HORVU0Hr1G017130.2 | Barley | endoplasmic reticulum, golgi, peroxisome | 5.06 | 6.0 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.1 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | InterPro:IPR023271 | UniProt:M1B2L4 | InterPro:MIP | PFAM:PF00230 | EnsemblPlantsGene:PGSC0003DMG402013710 |
| PGSC:PGSC0003DMG402013710 | EnsemblPlants:PGSC0003DMT400035640 | PRINTS:PR00783 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF142 | SUPFAM:SSF81338 |
| TMHMM:TMhelix | UniParc:UPI0002948ADC | SEG:seg | : | : | : |
Description
Gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG402013710]
Coordinates
chr00:-:7743231..7745065
Molecular Weight (calculated)
18839.1 Da
IEP (calculated)
8.485
GRAVY (calculated)
0.428
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MLFVKVPVYA AAQITGAISA AFTLRVLLHP VIKHVGTTTP SGSDIQALIM EIVVTFSMMF ITSAVATDTK AIGELAGIAV GSAVCITSIL AGPVSGGSMN
101: PARTIGPAMA SNDYRAIWVY IIGPVCGTLL GAWSYNFIKV NDKPVQAIAP GHSFSFKLRR MKSNHDEEQC VNKDPLND
101: PARTIGPAMA SNDYRAIWVY IIGPVCGTLL GAWSYNFIKV NDKPVQAIAP GHSFSFKLRR MKSNHDEEQC VNKDPLND
001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR
Arabidopsis Description
NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [peroxisome,golgi,vacuole]
SUBAcon: [peroxisome,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.