Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- golgi 1
- plasma membrane 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G017130.2 | Barley | endoplasmic reticulum, golgi, peroxisome | 46.97 | 41.33 |
| Zm00001d052261_P001 | Maize | cytosol, plasma membrane, plastid | 48.48 | 30.33 |
| VIT_14s0108g00700.t01 | Wine grape | peroxisome | 62.88 | 28.23 |
| GSMUA_Achr5P23340_001 | Banana | peroxisome | 55.3 | 24.91 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, peroxisome, plasma membrane | 53.79 | 24.23 |
| KRH40096 | Soybean | plastid | 53.79 | 24.23 |
| KRH01175 | Soybean | plastid | 53.03 | 23.73 |
| GSMUA_Achr6P02660_001 | Banana | cytosol, endoplasmic reticulum, golgi, mitochondrion | 54.55 | 22.29 |
| GSMUA_Achr9P27460_001 | Banana | cytosol, peroxisome, plasma membrane | 50.76 | 22.26 |
| Os02t0745100-01 | Rice | plasma membrane, vacuole | 50.0 | 22.15 |
| Os06t0228200-01 | Rice | plasma membrane | 49.24 | 21.81 |
| TraesCS6A01G307300.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 48.48 | 21.69 |
| TraesCS6B01G335900.1 | Wheat | golgi, peroxisome, plasma membrane | 48.48 | 21.69 |
| TraesCS6D01G286400.1 | Wheat | golgi, peroxisome, plasma membrane | 48.48 | 21.69 |
| TraesCS7A01G187800.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 49.24 | 21.67 |
| TraesCS7D01G188800.2 | Wheat | plasma membrane | 49.24 | 21.67 |
| EES07262 | Sorghum | cytosol, peroxisome, plasma membrane | 48.48 | 21.55 |
| EER89472 | Sorghum | cytosol, plasma membrane, plastid | 47.73 | 21.36 |
| Zm00001d018037_P001 | Maize | cytosol, peroxisome, plasma membrane | 47.73 | 21.36 |
| TraesCS7B01G092900.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 48.48 | 21.33 |
| HORVU7Hr1G038220.1 | Barley | endoplasmic reticulum, golgi, peroxisome | 48.48 | 21.33 |
| Zm00001d044826_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 48.48 | 21.26 |
| Zm00001d037228_P001 | Maize | cytosol, plasma membrane, plastid | 46.97 | 21.09 |
| HORVU6Hr1G075850.4 | Barley | nucleus, plasma membrane, vacuole | 49.24 | 20.44 |
| PGSC0003DMT400078337 | Potato | plasma membrane | 41.67 | 20.22 |
| PGSC0003DMT400073240 | Potato | cytosol, plasma membrane, vacuole | 26.52 | 19.34 |
| HORVU7Hr1G038270.3 | Barley | endoplasmic reticulum, golgi, vacuole | 50.0 | 18.03 |
| PGSC0003DMT400073246 | Potato | plasma membrane | 38.64 | 17.59 |
| PGSC0003DMT400071510 | Potato | plasma membrane | 36.36 | 17.33 |
| PGSC0003DMT400022061 | Potato | peroxisome, plasma membrane, plastid, vacuole | 32.58 | 16.54 |
| PGSC0003DMT400078773 | Potato | cytoskeleton, cytosol, plasma membrane | 33.33 | 16.48 |
| PGSC0003DMT400084932 | Potato | plasma membrane | 33.33 | 15.33 |
| PGSC0003DMT400015246 | Potato | endoplasmic reticulum, peroxisome, plasma membrane | 36.36 | 13.83 |
| PGSC0003DMT400014852 | Potato | cytosol, plasma membrane, plastid | 29.55 | 13.18 |
| PGSC0003DMT400036625 | Potato | plasma membrane | 30.3 | 13.07 |
| PGSC0003DMT400035640 | Potato | endoplasmic reticulum, extracellular | 6.06 | 4.49 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:35.1 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | InterPro:IPR023271 | UniProt:M1B2L3 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 |
| EnsemblPlantsGene:PGSC0003DMG401013710 | PGSC:PGSC0003DMG401013710 | EnsemblPlants:PGSC0003DMT400035638 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 |
| PANTHER:PTHR19139:SF142 | SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI0002954ABD | : | : |
Description
Aquaporin, MIP family, NIP subfamily [Source:PGSC_GENE;Acc:PGSC0003DMG401013710]
Coordinates
chr00:-:7756659..7757152
Molecular Weight (calculated)
14395.8 Da
IEP (calculated)
10.059
GRAVY (calculated)
0.364
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MESEGGKCSK SIKQNESVLK EDPKSAYLLI FLQKYYRSGF LKKVIAEIIA TYLLVFVTCG ASALSGSDEH KVSKLGASVA GGLIVTVMIY AVGHISGAHM
101: NPAVTFAFAA VRHFPWTQVR TLRLLISNKL FL
101: NPAVTFAFAA VRHFPWTQVR TLRLLISNKL FL
001: MYKSSSTSKF STHQKFQFLF YFSPNKKLTS TFFLKKMTSH GEEIEDEQIS RIEKGNCKDS QGGMETAICS SPSIVCLTQK LIAEMIGTYF IIFSGCGVVV
101: VNVLYGGTIT FPGICVTWGL IVMVMIYSTG HISGAHFNPA VTVTFAVFRR FPWYQVPLYI GAQLTGSLLA SLTLRLMFNV TPKAFFGTTP TDSSGQALVA
201: EIIISFLLMF VISGVATDSR ATGELAGIAV GMTIILNVFV AGPISGASMN PARSLGPAIV MGRYKGIWVY IVGPFVGIFA GGFVYNFMRF TDKPLRELTK
301: SASFLRSVAQ KDNASKSDG
101: VNVLYGGTIT FPGICVTWGL IVMVMIYSTG HISGAHFNPA VTVTFAVFRR FPWYQVPLYI GAQLTGSLLA SLTLRLMFNV TPKAFFGTTP TDSSGQALVA
201: EIIISFLLMF VISGVATDSR ATGELAGIAV GMTIILNVFV AGPISGASMN PARSLGPAIV MGRYKGIWVY IVGPFVGIFA GGFVYNFMRF TDKPLRELTK
301: SASFLRSVAQ KDNASKSDG
Arabidopsis Description
NIP4;2NOD26-like intrinsic protein 4;2 [Source:TAIR;Acc:AT5G37820]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.