Factsheet for VIT_14s0108g00700.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 2
peroxisome 2
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400035640	Potato	endoplasmic reticulum, extracellular	46.26	76.4
Solyc03g013340.2.1	Tomato	cytosol	69.39	72.08
PGSC0003DMT400035638	Potato	cytosol, golgi, plasma membrane	28.23	62.88
GSMUA_Achr10P...	Banana	endoplasmic reticulum, peroxisome, plasma membrane	61.56	61.77
GSMUA_Achr5P23340_001	Banana	peroxisome	61.56	61.77
Zm00001d052261_P001	Maize	cytosol, plasma membrane, plastid	42.52	59.24
TraesCS6B01G335900.1	Wheat	golgi, peroxisome, plasma membrane	57.82	57.63
Zm00001d018037_P001	Maize	cytosol, peroxisome, plasma membrane	57.82	57.63
TraesCS6D01G286400.1	Wheat	golgi, peroxisome, plasma membrane	57.48	57.29
TraesCS6A01G307300.1	Wheat	endoplasmic reticulum, golgi, peroxisome	57.48	57.29
Os06t0228200-01	Rice	plasma membrane	57.82	57.05
TraesCS7B01G092900.1	Wheat	endoplasmic reticulum, golgi, peroxisome	58.16	57.0
TraesCS7A01G187800.1	Wheat	endoplasmic reticulum, golgi, peroxisome	57.82	56.67
EES07262	Sorghum	cytosol, peroxisome, plasma membrane	57.14	56.57
GSMUA_Achr9P27460_001	Banana	cytosol, peroxisome, plasma membrane	57.82	56.48
TraesCS7D01G188800.2	Wheat	plasma membrane	57.48	56.33
HORVU7Hr1G038220.1	Barley	endoplasmic reticulum, golgi, peroxisome	57.48	56.33
EER89472	Sorghum	cytosol, plasma membrane, plastid	56.12	55.93
Zm00001d037228_P001	Maize	cytosol, plasma membrane, plastid	55.78	55.78
KRH40096	Soybean	plastid	55.1	55.29
KRH01175	Soybean	plastid	55.44	55.25
Zm00001d044826_P001	Maize	cytosol, endoplasmic reticulum, plastid	56.12	54.82
GSMUA_Achr6P02660_001	Banana	cytosol, endoplasmic reticulum, golgi, mitochondrion	60.2	54.8
Os02t0745100-01	Rice	plasma membrane, vacuole	55.44	54.7
HORVU0Hr1G017130.2	Barley	endoplasmic reticulum, golgi, peroxisome	25.85	50.67
HORVU6Hr1G075850.4	Barley	nucleus, plasma membrane, vacuole	47.62	44.03
VIT_11s0078g00490.t01	Wine grape	extracellular, peroxisome, vacuole	12.93	42.7
VIT_14s0006g01540.t01	Wine grape	plasma membrane	39.8	41.64
VIT_10s0003g01830.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	38.1	39.72
VIT_07s0141g00160.t01	Wine grape	extracellular	15.31	36.29
VIT_07s0141g00080.t01	Wine grape	extracellular	15.31	36.29
HORVU7Hr1G038270.3	Barley	endoplasmic reticulum, golgi, vacuole	44.56	35.79
VIT_02s0025g03260.t01	Wine grape	plastid	35.71	35.23
VIT_09s0070g00080.t01	Wine grape	plastid	38.44	31.92
VIT_14s0006g01560.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	12.59	31.62
VIT_05s0020g02740.t01	Wine grape	plasma membrane	30.61	30.72

Protein Annotations

Gene3D:1.20.1080.10	EntrezGene:100265406	wikigene:100265406	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
ProteinID:CBI22211	ProteinID:CBI22211.3	UniProt:D7SXB4	EMBL:FN595239	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833
GO:GO:0008150	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220
GO:GO:0055085	InterPro:IPR023271	EntrezGene:LOC100265406	wikigene:LOC100265406	InterPro:MIP	InterPro:MIP_CS
PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF142	SUPFAM:SSF81338
TMHMM:TMhelix	UniParc:UPI0001BE2195	ArrayExpress:VIT_14s0108g00700	EnsemblPlantsGene:VIT_14s0108g00700	EnsemblPlants:VIT_14s0108g00700.t01	RefSeq:XP_002278054
RefSeq:XP_002278054.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr14:+:29407401..29409742

Molecular Weight (calculated)

31003.6 Da

IEP (calculated)

8.331

GRAVY (calculated)

0.389

Length

294 amino acids

Sequence
(BLAST)

001: MATTDPNLSN STSINELTTA LHHPDSQNSN PCFLWRLFLE HYPPGFLRKV VAEVIATYLL VFVTCGSAAL SASDEQRVSK LGASVAGGLI VTAMIYAVGH
101: ISGAHMNPAV TLAFAAVRHF PWKQVPLYAA AQLTGAIGAA FTLRELLYPI KHLGTTTPSG TEIQALVMEI VVTFSMMFIT SAVATDTKAI GELAGIAVGS
201: AVCITSILAG PVSGGSMNPA RTLGPAIASA DYKGIWVYAV GPVSGTLLGT WSYNFIRVTE KPVQAISPHS FSLKLCRMRS NAGEISSKDP LNHV

Best Arabidopsis Sequence Match ( AT5G37820.2 )
(BLAST)

001: MYKSSSTSKF STHQKFQFLF YFSPNKKLTS TFFLKKMTSH GEEIEDEQIS RIEKGNCKDS QGGMETAICS SPSIVCLTQK LIAEMIGTYF IIFSGCGVVV
101: VNVLYGGTIT FPGICVTWGL IVMVMIYSTG HISGAHFNPA VTVTFAVFRR FPWYQVPLYI GAQLTGSLLA SLTLRLMFNV TPKAFFGTTP TDSSGQALVA
201: EIIISFLLMF VISGVATDSR ATGELAGIAV GMTIILNVFV AGPISGASMN PARSLGPAIV MGRYKGIWVY IVGPFVGIFA GGFVYNFMRF TDKPLRELTK
301: SASFLRSVAQ KDNASKSDG

Arabidopsis Description

NIP4;2NOD26-like intrinsic protein 4;2 [Source:TAIR;Acc:AT5G37820]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.