Factsheet for VIT_07s0141g00080.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0141g00160.t01	Wine grape	extracellular	100.0	100.0
VIT_11s0078g00490.t01	Wine grape	extracellular, peroxisome, vacuole	69.35	96.63
VIT_14s0006g01560.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	29.03	30.77
KRH18910	Soybean	plasma membrane	49.19	24.3
PGSC0003DMT400022061	Potato	peroxisome, plasma membrane, plastid, vacuole	50.81	24.23
Solyc12g057050.1.1	Tomato	extracellular, peroxisome, vacuole	49.19	23.46
KRH16737	Soybean	cytosol, peroxisome, vacuole	49.19	22.59
VIT_10s0003g01830.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	46.77	20.57
VIT_14s0006g01540.t01	Wine grape	plasma membrane	45.16	19.93
VIT_02s0025g03260.t01	Wine grape	plastid	41.13	17.11
VIT_14s0108g00700.t01	Wine grape	peroxisome	36.29	15.31
VIT_09s0070g00080.t01	Wine grape	plastid	41.94	14.69
VIT_05s0020g02740.t01	Wine grape	plasma membrane	33.87	14.33

Protein Annotations

Gene3D:1.20.1080.10	EntrezGene:100247981	wikigene:100247981	EntrezGene:100249698	wikigene:100249698	EntrezGene:100854763
wikigene:100854763	MapMan:35.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	ProteinID:CCB59082	ProteinID:CCB59082.1
ProteinID:CCB59083	ProteinID:CCB59083.1	UniProt:F6HWL8	EMBL:FN596274	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833
GO:GO:0008150	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220
GO:GO:0055085	InterPro:IPR023271	EntrezGene:LOC100247981	wikigene:LOC100247981	EntrezGene:LOC100249698	wikigene:LOC100249698
EntrezGene:LOC100854763	wikigene:LOC100854763	InterPro:MIP	PFAM:PF00230	PRINTS:PR00783	PANTHER:PTHR19139
PANTHER:PTHR19139:SF145	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI000210A48A	ArrayExpress:VIT_07s0141g00080	EnsemblPlantsGene:VIT_07s0141g00080
EnsemblPlants:VIT_07s0141g00080.t01	RefSeq:XP_002267708	RefSeq:XP_002267708.2	RefSeq:XP_003633183	RefSeq:XP_003633183.1	RefSeq:XP_003634831
RefSeq:XP_003634831.1	:	:	:	:	:

Description

No Description!

Coordinates

chr7_random:+:52369..53027

Molecular Weight (calculated)

13206.4 Da

IEP (calculated)

4.481

GRAVY (calculated)

0.877

Length

124 amino acids

Sequence
(BLAST)

001: MLNTSIPICA TVTQFSSPTT IPEAFTWEFI ISFILMLAIC GVATDSRAIN ELSGVTVGAT VLVNVLLAGP ITGASMNPAR SIGPALVSME FDCLWIYIVA
101: PILGTTTATV IYSFVRLPLP EKRL

Best Arabidopsis Sequence Match ( AT4G18910.1 )
(BLAST)

001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR

Arabidopsis Description

NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [peroxisome,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.