Factsheet for VIT_02s0025g03260.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	extracellular	66.11	88.34
Solyc08g013730.2.1	Tomato	cytosol, plasma membrane, plastid	86.91	87.8
PGSC0003DMT400014852	Potato	cytosol, plasma membrane, plastid	86.91	87.5
Bra033181.1-P	Field mustard	plasma membrane	82.21	81.4
CDY25253	Canola	plasma membrane	82.21	81.4
CDX94261	Canola	plasma membrane	81.88	81.06
AT4G10380.1	Thale cress	cytosol	81.54	79.93
CDY05100	Canola	plasma membrane	80.54	79.73
Bra000710.1-P	Field mustard	plasma membrane	80.2	79.4
CDX90757	Canola	plasma membrane	80.2	79.4
CDY72002	Canola	plastid	22.48	78.82
KRG91709	Soybean	plastid	67.45	78.82
KRH35064	Soybean	plastid	78.52	78.26
CDX67591	Canola	plasma membrane	78.86	78.07
EER91378	Sorghum	plastid	77.52	76.74
TraesCS1A01G177500.1	Wheat	plastid	75.84	75.33
TraesCS1B01G202700.1	Wheat	plastid	75.17	75.17
Zm00001d032461_P001	Maize	plastid	76.17	75.17
CDY51581	Canola	plastid	18.12	75.0
TraesCS1D01G176000.1	Wheat	plastid	75.17	74.92
Os10t0513200-01	Rice	plasma membrane	77.18	73.95
CDY16269	Canola	plastid	17.79	73.61
GSMUA_Achr1P04130_001	Banana	plasma membrane	82.89	68.8
HORVU3Hr1G014440.3	Barley	golgi, mitochondrion, plasma membrane	57.38	66.28
HORVU1Hr1G047100.3	Barley	plastid	65.1	52.86
VIT_09s0070g00080.t01	Wine grape	plastid	60.07	50.56
VIT_11s0078g00490.t01	Wine grape	extracellular, peroxisome, vacuole	13.76	46.07
VIT_10s0003g01830.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	40.27	42.55
VIT_07s0141g00080.t01	Wine grape	extracellular	17.11	41.13
VIT_07s0141g00160.t01	Wine grape	extracellular	17.11	41.13
VIT_14s0006g01540.t01	Wine grape	plasma membrane	37.92	40.21
VIT_14s0108g00700.t01	Wine grape	peroxisome	35.23	35.71
VIT_05s0020g02740.t01	Wine grape	plasma membrane	32.55	33.11
VIT_14s0006g01560.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	12.42	31.62

Protein Annotations

Gene3D:1.20.1080.10	EntrezGene:100265051	wikigene:100265051	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
ProteinID:CBI34648	ProteinID:CBI34648.3	UniProt:D7TVX3	EMBL:FN596251	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833
GO:GO:0007154	GO:GO:0008150	GO:GO:0009605	GO:GO:0009987	GO:GO:0009991	GO:GO:0010036
GO:GO:0015105	GO:GO:0015250	GO:GO:0015267	GO:GO:0015700	GO:GO:0016020	GO:GO:0016021
GO:GO:0016328	GO:GO:0034220	GO:GO:0035445	GO:GO:0046685	GO:GO:0046713	GO:GO:0046715
GO:GO:0055085	GO:GO:0080029	InterPro:IPR023271	EntrezGene:LOC100265051	wikigene:LOC100265051	InterPro:MIP
InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF102
SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI00015CC5F6	ArrayExpress:VIT_02s0025g03260	EnsemblPlantsGene:VIT_02s0025g03260	EnsemblPlants:VIT_02s0025g03260.t01
unigene:Vvi.4634	unigene:Vvi.5388	unigene:Vvi.9100	RefSeq:XP_002276319	RefSeq:XP_002276319.1	SEG:seg

Description

No Description!

Coordinates

chr2:+:2788379..2791515

Molecular Weight (calculated)

30698.4 Da

IEP (calculated)

8.989

GRAVY (calculated)

0.553

Length

298 amino acids

Sequence
(BLAST)

001: MAEAETGTPT ASAPATPGTP GGPLFSSLRV DSLSYDRKSM PRCKCLPVGA ASWAPSPTCF TDFPAPDVSL TRKLGAEFVG TFILIFAATA GPIVNQKYSG
101: VETLIGNAAC AGLAVMIVIL STGHISGAHL NPSLTIAFAA LRHFPWVQVP AYIAAQVSAS ICASFALKAV FHPFMSGGVT VPSVSIGQAF ALEFLITFNL
201: LFVVTAVATD TRAVGELAGI AVGATVMLNI LVAGPSSGGS MNPVRTLGPA VAAGNYRAIW IYLVAPTLGA VAGAAIYTAV KLRADEGEQP RQVRSFRR

Best Arabidopsis Sequence Match ( AT4G10380.1 )
(BLAST)

001: MAPPEAEVGA VMVMAPPTPG TPGTPGGPLI TGMRVDSMSF DHRKPTPRCK CLPVMGSTWG QHDTCFTDFP SPDVSLTRKL GAEFVGTFIL IFTATAGPIV
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR

Arabidopsis Description

NIP5-1At4g10380 [Source:UniProtKB/TrEMBL;Acc:A3KPG0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.