Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25253 | Canola | plasma membrane | 93.75 | 94.68 |
| Bra033181.1-P | Field mustard | plasma membrane | 93.75 | 94.68 |
| CDY72002 | Canola | plastid | 26.32 | 94.12 |
| CDY05100 | Canola | plasma membrane | 92.76 | 93.69 |
| CDX94261 | Canola | plasma membrane | 92.76 | 93.69 |
| CDX90757 | Canola | plasma membrane | 92.43 | 93.36 |
| Bra000710.1-P | Field mustard | plasma membrane | 92.43 | 93.36 |
| CDX67591 | Canola | plasma membrane | 89.47 | 90.37 |
| CDY51581 | Canola | plastid | 21.38 | 90.28 |
| CDY16269 | Canola | plastid | 21.05 | 88.89 |
| GSMUA_AchrUn_... | Banana | extracellular | 61.84 | 84.3 |
| VIT_02s0025g03260.t01 | Wine grape | plastid | 79.93 | 81.54 |
| Solyc08g013730.2.1 | Tomato | cytosol, plasma membrane, plastid | 78.95 | 81.36 |
| PGSC0003DMT400014852 | Potato | cytosol, plasma membrane, plastid | 78.95 | 81.08 |
| KRH35064 | Soybean | plastid | 72.04 | 73.24 |
| KRG91709 | Soybean | plastid | 60.86 | 72.55 |
| EER91378 | Sorghum | plastid | 71.71 | 72.43 |
| TraesCS1A01G177500.1 | Wheat | plastid | 70.72 | 71.67 |
| TraesCS1D01G176000.1 | Wheat | plastid | 70.39 | 71.57 |
| TraesCS1B01G202700.1 | Wheat | plastid | 70.07 | 71.48 |
| Zm00001d032461_P001 | Maize | plastid | 70.72 | 71.19 |
| Os10t0513200-01 | Rice | plasma membrane | 71.71 | 70.1 |
| AT1G80760.1 | Thale cress | golgi, peroxisome, plasma membrane | 64.8 | 64.59 |
| HORVU3Hr1G014440.3 | Barley | golgi, mitochondrion, plasma membrane | 54.61 | 64.34 |
| GSMUA_Achr1P04130_001 | Banana | plasma membrane | 74.34 | 62.95 |
| HORVU1Hr1G047100.3 | Barley | plastid | 60.86 | 50.41 |
| AT5G37810.1 | Thale cress | plasma membrane | 39.14 | 42.05 |
| AT4G18910.1 | Thale cress | golgi, peroxisome, vacuole | 38.82 | 40.14 |
| AT2G29870.1 | Thale cress | plastid | 18.09 | 39.57 |
| AT4G19030.1 | Thale cress | plasma membrane | 37.5 | 38.51 |
| AT5G37820.2 | Thale cress | plastid | 38.49 | 36.68 |
| AT2G34390.1 | Thale cress | plasma membrane | 33.55 | 35.42 |
| AT1G31885.1 | Thale cress | vacuole | 37.17 | 34.98 |
| AT3G06100.1 | Thale cress | plasma membrane | 30.92 | 34.18 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.1 | EntrezGene:826630 | UniProt:A3KPG0 | ProteinID:AEE82874.1 | ArrayExpress:AT4G10380 |
| EnsemblPlantsGene:AT4G10380 | RefSeq:AT4G10380 | TAIR:AT4G10380 | RefSeq:AT4G10380-TAIR-G | EnsemblPlants:AT4G10380.1 | TAIR:AT4G10380.1 |
| EMBL:AY087560 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | EMBL:BT030327 | ProteinID:CAB39791.1 | ProteinID:CAB78161.1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005887 |
| GO:GO:0006810 | GO:GO:0006833 | GO:GO:0007154 | GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009987 |
| GO:GO:0009991 | GO:GO:0010036 | GO:GO:0015105 | GO:GO:0015250 | GO:GO:0015267 | GO:GO:0015700 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016328 | GO:GO:0035445 | GO:GO:0046685 | GO:GO:0046713 |
| GO:GO:0046715 | GO:GO:0055085 | GO:GO:0080029 | InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS |
| Symbol:NIP5;1 | RefSeq:NP_192776.1 | PFAM:PF00230 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004013 | PO:PO:0004507 | PO:PO:0006085 | PO:PO:0007115 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020100 | PO:PO:0020131 |
| PO:PO:0025022 | PO:PO:0025181 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF159 |
| UniProt:Q9SV84 | SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI00000A5606 | SEG:seg | : |
Description
NIP5-1At4g10380 [Source:UniProtKB/TrEMBL;Acc:A3KPG0]
Coordinates
chr4:-:6431161..6435396
Molecular Weight (calculated)
31494.5 Da
IEP (calculated)
8.493
GRAVY (calculated)
0.507
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPPEAEVGA VMVMAPPTPG TPGTPGGPLI TGMRVDSMSF DHRKPTPRCK CLPVMGSTWG QHDTCFTDFP SPDVSLTRKL GAEFVGTFIL IFTATAGPIV
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.