Factsheet for AT5G37820.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
plasma membrane 3
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65403	Canola	plasma membrane	76.49	86.22
CDX99688	Canola	plasma membrane	75.55	85.16
AT5G37810.1	Thale cress	plasma membrane	74.61	84.1
Bra025436.1-P	Field mustard	plastid	51.72	83.76
Bra025435.1-P	Field mustard	plastid	41.38	80.49
PGSC0003DMT400078773	Potato	cytoskeleton, cytosol, plasma membrane	59.56	71.16
Solyc02g091420.2.1	Tomato	plasma membrane	58.62	70.04
CDY69767	Canola	plasma membrane	52.98	63.3
KRH73019	Soybean	cytosol, peroxisome, plasma membrane	50.78	62.07
KRH15118	Soybean	plasma membrane	49.84	60.92
AT4G18910.1	Thale cress	golgi, peroxisome, vacuole	45.45	49.32
Solyc02g063310.2.1	Tomato	cytosol, extracellular, vacuole	20.69	48.18
AT4G19030.1	Thale cress	plasma membrane	44.2	47.64
AT1G31885.1	Thale cress	vacuole	41.07	40.56
AT2G34390.1	Thale cress	plasma membrane	36.05	39.93
VIT_14s0006g01560.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	14.42	39.32
AT4G10380.1	Thale cress	cytosol	36.68	38.49
AT1G80760.1	Thale cress	golgi, peroxisome, plasma membrane	36.68	38.36
AT2G29870.1	Thale cress	plastid	16.61	38.13
AT3G06100.1	Thale cress	plasma membrane	29.78	34.55

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	EntrezGene:833760	UniProt:A0A1P8BA67	ProteinID:AED94236.1	EMBL:AJ276476
ProteinID:ANM68480.1	ArrayExpress:AT5G37820	EnsemblPlantsGene:AT5G37820	RefSeq:AT5G37820	TAIR:AT5G37820	RefSeq:AT5G37820-TAIR-G
EnsemblPlants:AT5G37820.2	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	Unigene:At.30462	ProteinID:BAB10361.1	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810
GO:GO:0006833	GO:GO:0008150	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021
GO:GO:0034220	GO:GO:0055085	InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	Symbol:NIP4;2
RefSeq:NP_001330234.1	RefSeq:NP_198598.1	ProteinID:OAO90662.1	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221
PANTHER:PTHR19139	PANTHER:PTHR19139:SF185	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI00084856F9

Description

NIP4;2NOD26-like intrinsic protein 4;2 [Source:TAIR;Acc:AT5G37820]

Coordinates

chr5:+:15050002..15051599

Molecular Weight (calculated)

34622.5 Da

IEP (calculated)

9.613

GRAVY (calculated)

0.413

Length

319 amino acids

Sequence
(BLAST)

001: MYKSSSTSKF STHQKFQFLF YFSPNKKLTS TFFLKKMTSH GEEIEDEQIS RIEKGNCKDS QGGMETAICS SPSIVCLTQK LIAEMIGTYF IIFSGCGVVV
101: VNVLYGGTIT FPGICVTWGL IVMVMIYSTG HISGAHFNPA VTVTFAVFRR FPWYQVPLYI GAQLTGSLLA SLTLRLMFNV TPKAFFGTTP TDSSGQALVA
201: EIIISFLLMF VISGVATDSR ATGELAGIAV GMTIILNVFV AGPISGASMN PARSLGPAIV MGRYKGIWVY IVGPFVGIFA GGFVYNFMRF TDKPLRELTK
301: SASFLRSVAQ KDNASKSDG

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.