Factsheet for AT2G34390.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plasma membrane, vacuole
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G29870.1	Thale cress	plastid	44.1	91.37
CDX84320	Canola	extracellular, plasma membrane, plastid, vacuole	86.46	87.06
CDX84321	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	86.11	86.71
CDY17241	Canola	cytosol, plasma membrane, plastid, vacuole	85.76	86.36
Bra005428.1-P	Field mustard	extracellular, plasma membrane, plastid, vacuole	85.76	86.36
Bra005430.1-P	Field mustard	cytosol, plasma membrane, plastid, vacuole	85.76	86.06
CDY17243	Canola	extracellular, plasma membrane, plastid, vacuole	85.42	86.01
AT4G18910.1	Thale cress	golgi, peroxisome, vacuole	52.78	51.7
AT4G19030.1	Thale cress	plasma membrane	52.78	51.35
AT1G31885.1	Thale cress	vacuole	47.92	42.72
PGSC0003DMT400073240	Potato	cytosol, plasma membrane, vacuole	26.39	41.99
TraesCS7B01G272700.1	Wheat	plasma membrane	40.62	41.94
TraesCS7D01G367800.1	Wheat	golgi, peroxisome, plasma membrane	40.62	41.94
TraesCS7A01G355000.1	Wheat	peroxisome	40.62	41.94
Solyc06g073590.2.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	48.26	40.29
AT5G37810.1	Thale cress	plasma membrane	39.58	40.28
Os06t0552700-01	Rice	cytosol, peroxisome, plastid	37.5	39.56
PGSC0003DMT400015246	Potato	endoplasmic reticulum, peroxisome, plasma membrane	47.22	39.19
KXG20157	Sorghum	golgi, nucleus, plasma membrane	38.19	37.8
Solyc02g071910.1.1	Tomato	endoplasmic reticulum, extracellular	29.51	36.8
AT5G37820.2	Thale cress	plastid	39.93	36.05
AT1G80760.1	Thale cress	golgi, peroxisome, plasma membrane	36.11	34.1
Zm00001d046303_P001	Maize	golgi, peroxisome, plasma membrane	37.5	34.07
AT4G10380.1	Thale cress	cytosol	35.42	33.55
AT3G06100.1	Thale cress	plasma membrane	28.82	30.18

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	EntrezGene:818002	UniProt:A0A178VT16	ProteinID:AAC26712.1	ProteinID:AAM14952.1
ProteinID:AEC08967.1	EMBL:AJ276475	ArrayExpress:AT2G34390	EnsemblPlantsGene:AT2G34390	RefSeq:AT2G34390	TAIR:AT2G34390
RefSeq:AT2G34390-TAIR-G	EnsemblPlants:AT2G34390.1	TAIR:AT2G34390.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	Unigene:At.38427
EMBL:BT025726	GO:GO:0001666	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0005886	GO:GO:0005887
GO:GO:0006810	GO:GO:0006833	GO:GO:0006950	GO:GO:0008150	GO:GO:0009628	GO:GO:0015129
GO:GO:0015250	GO:GO:0015267	GO:GO:0015727	GO:GO:0016020	GO:GO:0016021	GO:GO:0035873
GO:GO:0055085	InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	Symbol:NIP2;1	RefSeq:NP_180986.1
ProteinID:OAP08213.1	PFAM:PF00230	PO:PO:0000293	PO:PO:0009005	PO:PO:0009025	PO:PO:0009046
PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF155	UniProt:Q8W037	SUPFAM:SSF81338
TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI00000A1A4C	:	:	:

Description

NIP2-1Aquaporin NIP2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W037]

Coordinates

chr2:-:14514487..14515958

Molecular Weight (calculated)

30582.4 Da

IEP (calculated)

7.306

GRAVY (calculated)

0.547

Length

288 amino acids

Sequence
(BLAST)

001: MDDISVSKSN HGNVVVLNIK ASSLADTSLP SNKHESSSPP LLSVHFLQKL LAELVGTYYL IFAGCAAIAV NAQHNHVVTL VGIAVVWGIV IMVLVYCLGH
101: LSAHFNPAVT LALASSQRFP LNQVPAYITV QVIGSTLASA TLRLLFDLNN DVCSKKHDVF LGSSPSGSDL QAFVMEFIIT GFLMLVVCAV TTTKRTTEEL
201: EGLIIGATVT LNVIFAGEVS GASMNPARSI GPALVWGCYK GIWIYLLAPT LGAVSGALIH KMLPSIQNAE PEFSKTGSSH KRVTDLPL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.