Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g071910.1.1 | Tomato | endoplasmic reticulum, extracellular | 50.28 | 39.39 |
| PGSC0003DMT400071510 | Potato | plasma membrane | 44.2 | 28.88 |
| PGSC0003DMT400073246 | Potato | plasma membrane | 45.3 | 28.28 |
| Bra005428.1-P | Field mustard | extracellular, plasma membrane, plastid, vacuole | 43.09 | 27.27 |
| CDX84320 | Canola | extracellular, plasma membrane, plastid, vacuole | 43.09 | 27.27 |
| Bra005430.1-P | Field mustard | cytosol, plasma membrane, plastid, vacuole | 43.09 | 27.18 |
| PGSC0003DMT400078773 | Potato | cytoskeleton, cytosol, plasma membrane | 39.78 | 26.97 |
| CDX84321 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 42.54 | 26.92 |
| CDY17241 | Canola | cytosol, plasma membrane, plastid, vacuole | 42.54 | 26.92 |
| CDY17243 | Canola | extracellular, plasma membrane, plastid, vacuole | 42.54 | 26.92 |
| PGSC0003DMT400035638 | Potato | cytosol, golgi, plasma membrane | 19.34 | 26.52 |
| AT2G34390.1 | Thale cress | plasma membrane | 41.99 | 26.39 |
| TraesCS7D01G367800.1 | Wheat | golgi, peroxisome, plasma membrane | 39.78 | 25.81 |
| TraesCS7A01G355000.1 | Wheat | peroxisome | 39.78 | 25.81 |
| TraesCS7B01G272700.1 | Wheat | plasma membrane | 39.78 | 25.81 |
| Os06t0552700-01 | Rice | cytosol, peroxisome, plastid | 38.12 | 25.27 |
| PGSC0003DMT400078337 | Potato | plasma membrane | 37.57 | 25.0 |
| KXG20157 | Sorghum | golgi, nucleus, plasma membrane | 39.78 | 24.74 |
| PGSC0003DMT400022061 | Potato | peroxisome, plasma membrane, plastid, vacuole | 33.15 | 23.08 |
| PGSC0003DMT400015246 | Potato | endoplasmic reticulum, peroxisome, plasma membrane | 42.54 | 22.19 |
| Zm00001d046303_P001 | Maize | golgi, peroxisome, plasma membrane | 38.67 | 22.08 |
| PGSC0003DMT400036625 | Potato | plasma membrane | 35.91 | 21.24 |
| AT1G31885.1 | Thale cress | vacuole | 37.02 | 20.74 |
| PGSC0003DMT400014852 | Potato | cytosol, plasma membrane, plastid | 33.7 | 20.61 |
| CDY41749 | Canola | plasma membrane | 33.15 | 20.27 |
| AT2G29870.1 | Thale cress | plastid | 15.47 | 20.14 |
| Bra035520.1-P | Field mustard | plasma membrane | 35.91 | 20.12 |
| CDX84114 | Canola | plasma membrane | 35.91 | 19.46 |
| Bra033867.1-P | Field mustard | vacuole | 35.91 | 19.29 |
| CDY35532 | Canola | endoplasmic reticulum, extracellular, vacuole | 29.83 | 19.22 |
| CDY29922 | Canola | peroxisome, plasma membrane, vacuole | 33.7 | 18.6 |
| CDY35531 | Canola | vacuole | 32.04 | 18.53 |
| CDY29921 | Canola | vacuole | 32.04 | 18.41 |
| PGSC0003DMT400084932 | Potato | plasma membrane | 25.41 | 16.03 |
| PGSC0003DMT400035640 | Potato | endoplasmic reticulum, extracellular | 14.92 | 15.17 |
| CDY35528 | Canola | cytosol | 6.08 | 8.15 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:35.1 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | InterPro:IPR023271 | UniProt:M1CRM9 | InterPro:MIP | PFAM:PF00230 | EnsemblPlantsGene:PGSC0003DMG400028456 |
| PGSC:PGSC0003DMG400028456 | EnsemblPlants:PGSC0003DMT400073240 | PRINTS:PR00783 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF144 | SUPFAM:SSF81338 |
| TMHMM:TMhelix | UniParc:UPI0002960F2A | : | : | : | : |
Description
Aquaporin NIP1.1 [Source:PGSC_GENE;Acc:PGSC0003DMG400028456]
Coordinates
chr2:-:31365298..31366567
Molecular Weight (calculated)
19463.0 Da
IEP (calculated)
6.340
GRAVY (calculated)
0.584
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEISDISHA TALDIKDDNV HHILSCPCLA SKKLGDETIS FTQKLVAELL GTYLSMFAGF AAMVVNKNIG LLGIAVLWGL DMMVMIYTVG PVSGAHFNPA
101: VTVVVASCKR IAWRHEEQLQ FLRTIPAGSD LQSLGLEFLI TFYLMFAVAG TTMDNRAVGE LTGRVIGAVI TINSILAGYA K
101: VTVVVASCKR IAWRHEEQLQ FLRTIPAGSD LQSLGLEFLI TFYLMFAVAG TTMDNRAVGE LTGRVIGAVI TINSILAGYA K
001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AG
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AG
Arabidopsis Description
NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.