Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 1
  • vacuole 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, peroxisome, plasma membrane
BaCelLo:cytosol
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra035520.1-P Field mustard plasma membrane 95.81 99.07
CDY41749 Canola plasma membrane 84.73 95.61
AT1G31885.1 Thale cress vacuole 82.63 85.45
CDY35532 Canola endoplasmic reticulum, extracellular, vacuole 66.17 78.65
CDY35531 Canola vacuole 72.46 77.32
CDY29921 Canola vacuole 72.46 76.83
CDY35528 Canola cytosol 25.45 62.96
CDY29922 Canola peroxisome, plasma membrane, vacuole 61.08 62.2
CDY71538 Canola extracellular, plasma membrane, vacuole 36.23 53.07
CDX99689 Canola extracellular 24.85 49.11
CDX98596 Canola cytosol, peroxisome, plasma membrane 43.11 48.32
CDY01565 Canola cytosol, peroxisome, plasma membrane 43.11 48.32
CDY72002 Canola plastid 12.28 48.24
CDX78905 Canola cytosol, peroxisome, plasma membrane 42.81 48.15
CDX84320 Canola extracellular, plasma membrane, plastid, vacuole 40.72 47.55
CDX99688 Canola plasma membrane 40.12 47.35
CDY17243 Canola extracellular, plasma membrane, plastid, vacuole 40.42 47.2
CDY65403 Canola plasma membrane 39.82 47.0
CDX84321 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 40.12 46.85
CDY01700 Canola plasma membrane 39.52 46.64
CDX74558 Canola plasma membrane 39.52 46.64
CDY17241 Canola cytosol, plasma membrane, plastid, vacuole 39.82 46.5
CDX99411 Canola cytosol, peroxisome, plasma membrane 41.02 46.13
TraesCS7B01G272700.1 Wheat plasma membrane 37.72 45.16
TraesCS7D01G367800.1 Wheat golgi, peroxisome, plasma membrane 37.72 45.16
TraesCS7A01G355000.1 Wheat peroxisome 36.53 43.73
CDY16269 Canola plastid 9.28 43.06
CDY51581 Canola plastid 9.28 43.06
KXG20157 Sorghum golgi, nucleus, plasma membrane 37.43 42.96
Solyc06g073590.2.1 Tomato endoplasmic reticulum, peroxisome, plasma membrane 43.71 42.32
PGSC0003DMT400015246 Potato endoplasmic reticulum, peroxisome, plasma membrane 43.11 41.5
Os06t0552700-01 Rice cytosol, peroxisome, plastid 33.83 41.39
CDX94261 Canola plasma membrane 36.53 40.53
CDY25253 Canola plasma membrane 36.53 40.53
CDX67591 Canola plasma membrane 36.23 40.2
CDX90757 Canola plasma membrane 36.23 40.2
CDY05100 Canola plasma membrane 35.93 39.87
CDY53224 Canola cytosol, peroxisome, plasma membrane 36.23 39.67
CDY66949 Canola cytosol, peroxisome, plasma membrane 36.23 39.67
CDX87340 Canola cytosol, peroxisome, plasma membrane 35.93 39.34
CDY39946 Canola cytosol, peroxisome, plasma membrane 35.93 39.34
Solyc02g071910.1.1 Tomato endoplasmic reticulum, extracellular 26.35 38.1
Zm00001d046303_P001 Maize golgi, peroxisome, plasma membrane 35.33 37.22
PGSC0003DMT400073240 Potato cytosol, plasma membrane, vacuole 19.46 35.91
CDY27709 Canola plasma membrane 28.14 34.56
CDY05231 Canola plasma membrane 28.14 34.56
CDY69767 Canola plasma membrane 27.54 34.46
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.1GO:A0A078D6X2InterPro:Aquaporin-likeInterPro:Aquaporin_transptrEnsemblPlants:CDX84114
ProteinID:CDX84114ProteinID:CDX84114.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00140096001InterPro:IPR023271
InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139
PANTHER:PTHR19139:SF155SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixUniParc:UPI0004EEAAD1SEG:seg
Description
BnaC08g07910D
Coordinates
chrLK031835:-:1568288..1570191
Molecular Weight (calculated)
36097.6 Da
IEP (calculated)
7.629
GRAVY (calculated)
0.278
Length
334 amino acids
Sequence
(BLAST)
001: MAEISDTTPQ TQTVTFDIED GGSGGDSRSP GISRPLVSVS FVQKLIGEFV GTFSLIFAGC AAIVVNDTYG KAVTLPGIAL VWGLTVMVMI YSIGHVSGAH
101: FNPAVSIAFA SSRKFPFKQV PGYIAAQLLG STLAAEALRL VFHLDDNVCS LKGDVYVGTY PSSSNTATFV MEFITTFNLM FVISAVATDK RANGSFAGIA
201: IGATVVLDIL FCGYYYFCFI KNMQPISGAS MNPARSLGPA LIWGCYKDLW LYIVSPVIGA LTGAWTYDML RSTKKSYGEI IRPNCNKIPS RDRQEASQDE
301: ICVLQVVNQA NRKEFICSSP TDINDKRNVT CKLP
Best Arabidopsis Sequence Match ( AT1G31885.1 )
(BLAST)
001: MAEISDITTQ TQTVVLDIEN YQSIDDSRSS DLSAPLVSVS FVQKLIGEFV GTFTMIFAGC SAIVVNETYG KPVTLPGIAL VWGLVVTVMI YSIGHVSGAH
101: FNPAVSIAFA SSKKFPFNQV PGYIAAQLLG STLAAAVLRL VFHLDDDVCS LKGDVYVGTY PSNSNTTSFV MEFIATFNLM FVISAVATDK RATGSFAGIA
201: IGATIVLDIL FSGPISGASM NPARSLGPAL IWGCYKDLWL YIVSPVIGAL SGAWTYGLLR STKKSYSEII RPNCNKVSSR DRQEASQDEI CVLRVVDPAN
301: QNYFICSSPT DINGKCNVTC KLA
Arabidopsis Description
NIP3-1Aquaporin NIP3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6T0]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.