Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 6
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71538 | Canola | extracellular, plasma membrane, vacuole | 95.27 | 70.61 |
| Bra025437.1-P | Field mustard | plasma membrane | 94.08 | 57.61 |
| CDY72002 | Canola | plastid | 26.63 | 52.94 |
| CDY65403 | Canola | plasma membrane | 85.8 | 51.24 |
| CDX99688 | Canola | plasma membrane | 84.62 | 50.53 |
| CDY51581 | Canola | plastid | 20.71 | 48.61 |
| CDY16269 | Canola | plastid | 20.71 | 48.61 |
| CDX74558 | Canola | plasma membrane | 78.7 | 47.0 |
| CDY01700 | Canola | plasma membrane | 78.7 | 47.0 |
| PGSC0003DMT400078773 | Potato | cytoskeleton, cytosol, plasma membrane | 69.82 | 44.19 |
| Solyc02g091420.2.1 | Tomato | plasma membrane | 68.05 | 43.07 |
| KRH73019 | Soybean | cytosol, peroxisome, plasma membrane | 57.4 | 37.16 |
| KRH15118 | Soybean | plasma membrane | 56.8 | 36.78 |
| VIT_14s0006g01560.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 25.44 | 36.75 |
| CDY35528 | Canola | cytosol | 27.81 | 34.81 |
| CDY69767 | Canola | plasma membrane | 51.48 | 32.58 |
| CDY01565 | Canola | cytosol, peroxisome, plasma membrane | 56.8 | 32.21 |
| CDX98596 | Canola | cytosol, peroxisome, plasma membrane | 56.8 | 32.21 |
| CDX78905 | Canola | cytosol, peroxisome, plasma membrane | 56.21 | 31.99 |
| CDX99411 | Canola | cytosol, peroxisome, plasma membrane | 55.62 | 31.65 |
| CDY41749 | Canola | plasma membrane | 49.11 | 28.04 |
| CDY35532 | Canola | endoplasmic reticulum, extracellular, vacuole | 46.15 | 27.76 |
| CDX67591 | Canola | plasma membrane | 46.75 | 26.25 |
| CDX90757 | Canola | plasma membrane | 45.56 | 25.58 |
| CDY05100 | Canola | plasma membrane | 45.56 | 25.58 |
| CDY25253 | Canola | plasma membrane | 44.97 | 25.25 |
| CDX94261 | Canola | plasma membrane | 44.97 | 25.25 |
| CDX84114 | Canola | plasma membrane | 49.11 | 24.85 |
| CDX87340 | Canola | cytosol, peroxisome, plasma membrane | 44.38 | 24.59 |
| CDY39946 | Canola | cytosol, peroxisome, plasma membrane | 44.38 | 24.59 |
| CDY53224 | Canola | cytosol, peroxisome, plasma membrane | 43.2 | 23.93 |
| CDY66949 | Canola | cytosol, peroxisome, plasma membrane | 42.6 | 23.61 |
| CDX84320 | Canola | extracellular, plasma membrane, plastid, vacuole | 38.46 | 22.73 |
| CDY29921 | Canola | vacuole | 42.01 | 22.54 |
| CDY17241 | Canola | cytosol, plasma membrane, plastid, vacuole | 37.87 | 22.38 |
| CDY17243 | Canola | extracellular, plasma membrane, plastid, vacuole | 37.87 | 22.38 |
| CDX84321 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 37.87 | 22.38 |
| CDY35531 | Canola | vacuole | 41.42 | 22.36 |
| CDY29922 | Canola | peroxisome, plasma membrane, vacuole | 40.83 | 21.04 |
| CDY05231 | Canola | plasma membrane | 31.95 | 19.85 |
| CDY27709 | Canola | plasma membrane | 31.95 | 19.85 |
| Solyc02g063310.2.1 | Tomato | cytosol, extracellular, vacuole | 10.06 | 12.41 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.1 | GO:A0A078EFW4 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | EnsemblPlants:CDX99689 |
| ProteinID:CDX99689 | ProteinID:CDX99689.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00108253001 | InterPro:IPR023271 |
| InterPro:MIP | PFAM:PF00230 | PRINTS:PR00783 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF185 | SUPFAM:SSF81338 |
| TMHMM:TMhelix | UniParc:UPI0004EEBED3 | SEG:seg | : | : | : |
Description
BnaC04g34460D
Coordinates
chrLK031912:-:1169496..1170762
Molecular Weight (calculated)
17994.6 Da
IEP (calculated)
9.137
GRAVY (calculated)
0.802
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MMEMICIICF GQVPLYVGAQ LAGSLLASLT LRLMFKVTPE AYFGTTPTDS AARALVAEII ISFLLMFVIS GVSTDSRAIG ELAGIAVGMT IMLNVFVAGP
101: ISGASMNPAR SLGPAIVMGV YKDIWVYIVG PIAGVMAGGF VYNFIRFTDK PLRELTKSAS FLRSISPKQ
101: ISGASMNPAR SLGPAIVMGV YKDIWVYIVG PIAGVMAGGF VYNFIRFTDK PLRELTKSAS FLRSISPKQ
001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR
Arabidopsis Description
NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [peroxisome,golgi,vacuole]
SUBAcon: [peroxisome,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.